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AT1G73920.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G18460.1); Has 1703 Blast hits to 1686 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 1158; Fungi - 276; Plants - 166; Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0596eggNOG:KOG2624EMBL:AY050984EMBL:BT004416
EMBL:CP002684EnsemblPlants:AT1G73920EnsemblPlants:AT1G73920.1entrez:843729
ESTHER:arath-AT1G73920ExpressionAtlas:Q949N8Gene3D:3.40.50.1820GeneID:843729
GO:GO:0006629GO:GO:0016787Gramene:AT1G73920.1hmmpanther:PTHR11005
hmmpanther:PTHR11005:SF17HOGENOM:HOG000029636InterPro:IPR006693InterPro:IPR029058
KEGG:ath:AT1G73920merops:S33.A62OMA:TIVEYIFPfam:PF04083
PhylomeDB:Q949N8Proteomes:UP000006548RefSeq:NP_565075.1STRING:3702.AT1G73920.1
SUPFAM:SSF53474TAIR:AT1G73920UniGene:At.23253UniGene:At.67278
UniProt:Q949N8
Coordinates (TAIR10) chr1:+:27791194..27794698
Molecular Weight (calculated) 80043.70 Da
IEP (calculated) 8.02
GRAVY (calculated) -0.29
Length 704 amino acids
Sequence (TAIR10)
(BLAST)
001: MQRIVDNALA VTKESVKTVT YESLNNIARC INGVSALLLT LLPGKANILE GLHGWELRPT FRGPRLPRWM HNGVSSFNEF IHELSVDSDT SSLEYSSGED
101: SDGPLPPSPS SQSSRLSWAS TSASSENHWT EWITFILWWL MFPVRILLWI PQYIISLFYK RSSRIPASPR RHQHSSRPRI SKTNSSKDHD VPNRTTDRRR
201: GVIEDLHLAI EIGIEAIFDF FHKATHLLLS PSEAFAILLS WFSSSSRSPK ENHGEVAYDE TVQTATLGDT DPSPTERPVE SPTRLYNSMN TDTRTCQDVI
301: TELGYPYEAI RVITSDGYVL VLERIPRRDA RKAVFLQHGV LDSSMGWVSN GVVGSPAFAA YDQGYDVFLG NFRGLVSRDH VNKNISSKEF WRYSINEHGT
401: EDIPAMIEKI HEIKTTELKL CQPNIDEEIN QEEPYKLCAI CHSLGGAAIL MYVITRKIKE KPHRLSRLIL LSPAGFHEDS NLGFTIVEYI FLFISPVLAR
501: IVPAFYIPTR FFRMLLNKLA RDFHNYPALG GLVQTLMSYV VGGDSSNWVG VLGLPHYNMN DMPAVSFRVA QHLAQIKHTG KFRMYDYGSR SANMEVYGSP
601: EPLDLGESYK FIDVPVDLVA GRNDKVIRSS MVKKHYNVMR DAEVDVSFNE FEYAHLDFTF SHREELLRYV MSRLLLVKQT PVQQRQTSQK GMKLKKKKKE
701: GTVV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)