AT3G50530.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.999 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : CDPK-related kinase | ||||||||||||
| Curator Summary (TAIR10) |
CDPK-related kinase | ||||||||||||
| Computational Description (TAIR10) |
CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:18753833..18756487 | ||||||||||||
| Molecular Weight (calculated) | 70482.40 Da | ||||||||||||
| IEP (calculated) | 9.17 | ||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||
| Length | 632 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA 101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV 201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL 301: SDYVRPGKAL RLYAICKLRF QNLETSICLY ALTIAFADER LNDIVGSAYY VAPEVLHRSY STEADIWSVG VIVYILLCGS RPFWARTESG IFRAVLKADP 401: SFDDPPWPLL SSEARDFVKR LLNKDPRKRL TAAQALSHPW IKDSNDAKVP MDILVFKLMR AYLRSSSLRK AALRALSKTL TVDELFYLRE QFALLEPSKN 501: GTISLENIKS ALMKMATDAM KDSRIPEFLG QLSALQYRRM DFEEFCAAAL SVHQLEALDR WEQHARCAYE LFEKEGNRPI MIDELASELG LGPSVPVHAV 601: LHDWLRHTDG KLSFLGFVKL LHGVSSRTIK AH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)