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AT3G11900.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.999
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aromatic and neutral transporter 1
Curator
Summary (TAIR10)
encodes an amino acid transporter that transports aromatic and neutral amino acids, IAA, and 2,4-D. Expressed in all tissues with highest abundance in flowers and cauline leaves. a member of a small gene family in Arabidopsis and represents a new class of amino acid transporters.
Computational
Description (TAIR10)
aromatic and neutral transporter 1 (ANT1); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT4G38250.1); Has 4625 Blast hits to 4600 proteins in 287 species: Archae - 17; Bacteria - 63; Metazoa - 1652; Fungi - 791; Plants - 1313; Viruses - 9; Other Eukaryotes - 780 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0814eggNOG:KOG1304EMBL:AC016795EMBL:AK227614EMBL:BT008302EMBL:CP002686EMBL:U39783
EnsemblPlants:AT3G11900EnsemblPlants:AT3G11900.1entrez:820363GeneID:820363Genevisible:Q9SF09GO:GO:0005886GO:GO:0009624
GO:GO:0015173GO:GO:0015175GO:GO:0015801GO:GO:0015804GO:GO:0016020GO:GO:0016021Gramene:AT3G11900.1
hmmpanther:PTHR22950hmmpanther:PTHR22950:SF282InParanoid:Q9SF09InterPro:IPR013057KEGG:ath:AT3G11900KO:K14209OMA:GFATYYC
PaxDb:Q9SF09Pfam:PF01490Pfam:Q9SF09PhylomeDB:Q9SF09PRIDE:Q9SF09PRO:PR:Q9SF09ProteinModelPortal:Q9SF09
Proteomes:UP000006548Reactome:R-ATH-352230Reactome:R-ATH-428559RefSeq:NP_187796.1STRING:3702.AT3G11900.1TAIR:AT3G11900tair10-symbols:ANT1
TMHMM:TMhelixUniGene:At.10476UniProt:Q9SF09
Coordinates (TAIR10) chr3:+:3758523..3760103
Molecular Weight (calculated) 46473.10 Da
IEP (calculated) 5.16
GRAVY (calculated) 0.68
Length 432 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIKDLTATT GDSSLPLIKS PPSETTGGDR TSALQTLGNI IVSIVGTGVL GLPYAFRIAG WLAGSLGVII VGFATYYCML LLIQCRDKLE SEEGEEESKT
101: YGDLGFKCMG TKGRYLTEFL IFTAQCGGSV AYLVFIGRNL SSIFSSYGLS MVSFILILVP IEVGLSWITS LSALSPFSIF ADICNIIAMC FVVKENVEMV
201: IEGDFSFSDR TAISSTIGGL PFAGGVAVFC FEGFAMTLAL ESSMREREAF PKLLAKVLAG ITFVYVLFGF CGYMAYGDQT KDIITLNLPN NWSAIAVQIG
301: LCVGLTFTFP IMVHPLNEII EQKLKRIDWL QKHHNGYSNE TGSVSKFAIF TTRTLLVVGL AAIASLVPGF GTFASLVGST LCALISFVLP ASYHLTLLGP
401: SLNVWNKSID VFIVICGLIF AVYGTYNTIV GV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)