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AT3G04080.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23034877 (2012): Golgi Golgi apparatus Golgi membrane
  • PMID:22849572 (2012): Golgi trans-Golgi network
  • PMID:22430844 (2012): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : apyrase 1
Curator
Summary (TAIR10)
Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination.
Computational
Description (TAIR10)
apyrase 1 (APY1); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 2 (TAIR:AT5G18280.1); Has 1435 Blast hits to 1431 proteins in 229 species: Archae - 0; Bacteria - 35; Metazoa - 605; Fungi - 313; Plants - 348; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G04080-MONOMEREC:3.6.1.5eggNOG:COG5371eggNOG:KOG1385EMBL:AC016829EMBL:AF093604EMBL:BT029157
EMBL:CP002686EMBL:JQ937231EnsemblPlants:AT3G04080EnsemblPlants:AT3G04080.1entrez:819563GeneID:819563Genevisible:Q9SQG2
GO:GO:0000139GO:GO:0004382GO:GO:0005524GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0009846
GO:GO:0016021GO:GO:0045134GO:GO:0090450Gramene:AT3G04080.1hmmpanther:PTHR11782hmmpanther:PTHR11782:SF50HOGENOM:HOG000220904
InParanoid:Q9SQG2InterPro:IPR000407KEGG:ath:AT3G04080KO:K14641OMA:VQHVFDEPANTHER:PTHR11782PaxDb:Q9SQG2
Pfam:PF01150Pfam:Q9SQG2PhylomeDB:Q9SQG2PRIDE:Q9SQG2PRO:PR:Q9SQG2PROSITE:PS01238ProteinModelPortal:Q9SQG2
Proteomes:UP000006548RefSeq:NP_187058.1scanprosite:PS01238SMR:Q9SQG2STRING:3702.AT3G04080.1TAIR:AT3G04080tair10-symbols:APY1
tair10-symbols:ATAPY1TMHMM:TMhelixUniGene:At.16940UniProt:Q9SQG2
Coordinates (TAIR10) chr3:-:1068068..1070917
Molecular Weight (calculated) 51196.50 Da
IEP (calculated) 8.41
GRAVY (calculated) -0.16
Length 471 amino acids
Sequence (TAIR10)
(BLAST)
001: MTAKRAIGRH ESLADKVHRH RGLLLVISIP IVLIALVLLL MPGTSTSVSV IEYTMKNHEG GSNSRGPKNY AVIFDAGSSG SRVHVYCFDQ NLDLVPLENE
101: LELFLQLKPG LSAYPNDPRQ SANSLVTLLD KAEASVPREL RPKTPVRVGA TAGLRALGHQ ASENILQAVR ELLKGRSRLK TEANAVTVLD GTQEGSYQWV
201: TINYLLRTLG KPYSDTVGVV DLGGGSVQMA YAIPEEDAAT APKPVEGEDS YVREMYLKGR KYFLYVHSYL HYGLLAARAE ILKVSEDSNN PCIATGYAGT
301: YKYGGKAFKA AASPSGASLD ECRRVAINAL KVNNSLCTHM KCTFGGVWNG GGGGGQKKMF VASFFFDRAA EAGFVDPNQP VAEVRPLDFE KAANKACNMR
401: MEEGKSKFPR VEEDNLPYLC LDLVYQYTLL VDGFGLKPSQ TITLVKKVKY GDYAVEAAWP LGSAIEAVSS P
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)