AT5G14310.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.646 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : carboxyesterase 16 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
carboxyesterase 16 (CXE16); FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDXG, active site (InterPro:IPR002168), Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT3G27320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr5:+:4615592..4617422 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 49370.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.03 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 446 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MPGVAVKLYS VFFKLLLKHR LQNLISISAA DGLSDSFGVS TRSDESVAAA NPSFTDGVAT KDIHIDPMTS LTVRIFLPES ALSPEPDSLR HKDNYNHQPR 101: SDRRHSYGPN HNSPAPAERN ESRRNSYGCN NENLEPYGGY APSAKRNSRK LPVMLQFHGG GWVSGSSDSA ANDFFCRRIA KVCDVIVLAV GYRLAPENRY 201: PAAFEDGVKV LHWLGKQANL ADCCKSLGNR RVNGVEVKKL NVQGQIVDAF GASMVEPWLA AHADPSRCVL LGVSCGGNIA DYVARKAVEA GKLLEPVKVV 301: AQVLMYPFFI GNNPTQSEIK LANSYFYDKP VSVLAWKLFL PEKEFDFDHP AANPLAHNRS GPPLKLMPPT LTVVAEHDWM RDRAIAYSEE LRKVNVDSPV 401: LEYKDAVHEF ATLDMLLKTP QAQACAEDIA IWVKKYISLR GHEFSY |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)