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AT3G10370.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30135097 (2018): plastid
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21841088 (2011): mitochondrion
  • PMID:21433285 (2011): plasma membrane
  • PMID:21311031 (2011): mitochondrion
  • PMID:19334764 (2009): plasma membrane
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FAD-dependent oxidoreductase family protein
Curator
Summary (TAIR10)
mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.
Computational
Description (TAIR10)
SUGAR-DEPENDENT 6 (SDP6); FUNCTIONS IN: glycerol-3-phosphate dehydrogenase activity; INVOLVED IN: glycerophosphate shuttle, glycerol metabolic process, glycerol catabolic process; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076), FAD-dependent glycerol-3-phosphate dehydrogenase (InterPro:IPR000447); Has 7040 Blast hits to 7029 proteins in 1867 species: Archae - 83; Bacteria - 4925; Metazoa - 247; Fungi - 177; Plants - 55; Viruses - 0; Other Eukaryotes - 1553 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G10370-MONOMERBioCyc:MetaCyc:AT3G10370-MONOMERBioGrid:5533EC:1.1.5.3
eggNOG:COG0578eggNOG:KOG0042EMBL:AC009400EMBL:AY063863
EMBL:AY096363EMBL:CP002686EnsemblPlants:AT3G10370EnsemblPlants:AT3G10370.1
entrez:820199Gene3D:3.50.50.60GeneID:820199Genevisible:Q9SS48
GO:GO:0004368GO:GO:0005739GO:GO:0005743GO:GO:0006072
GO:GO:0006127GO:GO:0009331GO:GO:0019563GO:GO:0052591
Gramene:AT3G10370.1gramene_pathway:1.1.5.3gramene_pathway:PWY-4261gramene_pathway:PWY-6118
hmmpanther:PTHR11985hmmpanther:PTHR11985:SF15HOGENOM:HOG000004813InParanoid:Q9SS48
InterPro:IPR000447InterPro:IPR006076InterPro:IPR023753InterPro:IPR031656
KEGG:00564+1.1.5.3KEGG:ath:AT3G10370KO:K00111OMA:CIVNAAG
PaxDb:Q9SS48Pfam:PF01266Pfam:PF16901Pfam:Q9SS48
PhylomeDB:Q9SS48PRIDE:Q9SS48PRINTS:PR01001PRO:PR:Q9SS48
PROSITE:PS00977PROSITE:PS00978ProteinModelPortal:Q9SS48Proteomes:UP000006548
Reactome:R-ATH-535734RefSeq:NP_187648.1scanprosite:PS00977scanprosite:PS00978
SMR:Q9SS48STRING:3702.AT3G10370.1SUPFAM:SSF51905SUPFAM:SSF54373
TAIR:AT3G10370tair10-symbols:SDP6UniGene:At.18427UniPathway:UPA00618
UniProt:Q9SS48
Coordinates (TAIR10) chr3:+:3216502..3219027
Molecular Weight (calculated) 68454.90 Da
IEP (calculated) 8.11
GRAVY (calculated) -0.16
Length 629 amino acids
Sequence (TAIR10)
(BLAST)
001: MSLASIRRLA AGAAVIAAAS GGAVYLSPSV ASSDKGGGPI LDSLRRRLGD PTASVPSRSA QESALIAATA SDPLDVLVIG GGATGSGVAL DAVTRGLRVG
101: LVEREDFSSG TSSRSTKLIH GGVRYLEKAV FNLDYGQLKL VFHALEERKQ LIENAPHLCH ALPCMTPCFD WFEVIYFWMG LKMYDLVAGP RLLHLSRYYS
201: AKESIELFPT LARKGKDKNL RGTVVYYDGQ MNDSRLNVGL ACTAALAGAA VLNHAEVVSL ITDDATKRII GARIRNNLTG QEFNSYAKVV VNAAGPFCDS
301: IRKMIDEDTK PMICPSSGVH IVLPDYYSPE GMGLIVPKTK DGRVVFMLPW LGRTVAGTTD SNTSITSLPE PHEDEIQFIL DAISDYLNIK VRRTDVLSAW
401: SGIRPLAMDP TAKSTESISR DHVVFEENPG LVTITGGKWT TYRSMAEDAV DAAIKSGQLK PTNECVTQKL QLLGSYGWEP SSFTTLAQQY VRMKKTYGGK
501: VVPGAMDTAA AKHLSHAYGS MADRVATIAQ EEGLGKRLAH GHPFLEAEVA YCARHEYCES AVDFIARRCR IAFLDTDAAA RALQRVVEIL ASEHKWDKSR
601: QKQELQKAKE FLETFKSSKN AQFNDGKHN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)