AT2G17410.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARID/BRIGHT DNA-binding domain-containing protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G76510.2). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:7559869..7563474 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 86048.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.26 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||||||||||||||||||||||||||
| Length | 780 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MENLTEIEST MESLTEMESE RVEQGTDKEI GSGEKRQDDV KETENENSGE RVGEEAPVRE HEDSPCLIVI EEGTSLASLE EVTNADDLPK IDDEKNSQFE 101: TSPHPSPSPS VALDTEEGLI NPTAEDTVEE NIVSSEVSSD ILKDDGDAVE VDRDTAEVQE ETANIPESKL SEDTGSPHHH ADILMVQEKA AEEHDMIASG 201: DHEEFPVNPD NKHSEENQSP HHHANNVMEQ DQAAEEREII SPGEHKEIPA NPDTKVVEEN NDRIDEGEAN NLNLAGDGSG AVDHDYLTKT ELDKVLEVPG 301: SETISKLEDR PSEHLSETSM NVEKELEMPA VEILPDNDKN SDVLAVGVSG DSDNVVSVLP ASQTSSDRDE GMITVDAEPT EDMKLDVPDS KLVTDTTVDS 401: TNNKDAHVEA NTERQDNSSA LVLNDANNES APVKRVPGPY VASSNIKSEA RGSGDLNNGV HKIVRTPPVF DGTMRAKRSF LLDDASDGNE SGTEEDQSAF 501: MKELDSFFRE RNMDFKPPKF YGEGLNCLKL WRAVTRLGGY DKVTGSKLWR QVGESFRPPK TCTTVSWTFR GFYEKALLEY ERHKVSEGEL QIPLPLELEP 601: MNIDNQASGS GRARRDAASR AMQGWHSQRL NGNGEVSDPA IKDKNLVLHQ KREKQIGTTP GLLKRKRAAE HVVVFPRLDV TVVDVGPPAD WVKINVQRTQ 701: DCFEVYALVP GLVREEVRVQ SDPAGRLVIS GEPENPMNPW GATPFKKVVS LPTRIDPHHT SAVVTLNGQL FVRVPLEQLE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)