AT2G15860.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.925 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 110 Blast hits to 109 proteins in 51 species: Archae - 0; Bacteria - 4; Metazoa - 37; Fungi - 10; Plants - 37; Viruses - 3; Other Eukaryotes - 19 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:6905712..6909282 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 56906.40 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.38 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||
| Length | 524 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEDKQMHEE KSSLVKEEPV RGEEPEIEKL TVADVDAPPK STGGWGWGFS GFSVLSDLQK AAEDISRNAA AVAEKAAKSI AEMGEVDEDS ESSAKEEEKT 101: EEADTEQDSD DENAKLKKSA LERLEGASEE SLLSQANLCS SICYFLLGLK VFDDSVESFT SGAWQAFGNA LKGGTSLVQK LENSVQQGSS PREAGSGAPS 201: LLETGKALTA KGMQVLEFVG KETMDLLITE TGIGAEKDRV DFKDQVLEEV TFDRCFYIYG GPEQLEELEA LASHYTLLFN RRKGKLSPDQ KSLYDGKLKQ 301: IQQLFSFADE MSGSKAESDK GKKIDIKTEG NDDDMKNLHN SSVSKAADMA TGFTNALAGL HVNDMIQRTG GRLESLHSEG VHRLSEMCCF AVTHLLILGK 401: SMISHANKVQ DEDTEALKIE WAEDPTEKAK LIRGKAETMA GYVEAVSNSF ITGISDVSET YSAAIKGVAA ADSKDDLLKT STMQEKASTF NDSLRSDQTT 501: AITKIQEGLQ YLSYVVISTS MPSA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)