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AT1G77610.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 0.549
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
EamA-like transporter family protein; FUNCTIONS IN: organic anion transmembrane transporter activity; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620), Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 5 (TAIR:AT1G21870.1); Has 3475 Blast hits to 3470 proteins in 365 species: Archae - 2; Bacteria - 169; Metazoa - 728; Fungi - 565; Plants - 1539; Viruses - 0; Other Eukaryotes - 472 (source: NCBI BLink).
Protein Annotations
BioGrid:29315eggNOG:ENOG410XP1SeggNOG:KOG1441EMBL:AC010704EMBL:AF360161EMBL:AJ633720EMBL:AY113887
EMBL:CP002684EnsemblPlants:AT1G77610EnsemblPlants:AT1G77610.1entrez:844096GeneID:844096Genevisible:Q9C521GO:GO:0005457
GO:GO:0005459GO:GO:0005460GO:GO:0005794GO:GO:0015783GO:GO:0015786GO:GO:0016021GO:GO:0072334
Gramene:AT1G77610.1hmmpanther:PTHR11132hmmpanther:PTHR11132:SF127HOGENOM:HOG000242536InParanoid:Q9C521IntAct:Q9C521InterPro:IPR004853
KEGG:ath:AT1G77610OMA:AMNAIGCPaxDb:Q9C521Pfam:PF03151Pfam:Q9C521PhylomeDB:Q9C521PIR:F96805
PRIDE:Q9C521PRO:PR:Q9C521ProteinModelPortal:Q9C521Proteomes:UP000006548RefSeq:NP_565158.1STRING:3702.AT1G77610.1SUPFAM:0043518
TAIR:AT1G77610TMHMM:TMhelixUniGene:At.17804UniProt:Q9C521
Coordinates (TAIR10) chr1:+:29165489..29167486
Molecular Weight (calculated) 37793.20 Da
IEP (calculated) 9.52
GRAVY (calculated) 0.67
Length 336 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)