AT1G64960.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.952 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HEAT (InterPro:IPR000357), Armadillo-type fold (InterPro:IPR016024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24129918..24134049 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 134117.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.39 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||||||||||
| Length | 1203 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEKRLRSSLK TSSEEFLSSA VKLTLKSSKP SLKTIINAVK PSSDLSSSLP LALHNSILHH TESFQKLLDE VNNNNTYIPS PSNSPPTKRH RGTTGTSPDS 0101: DLDQRKHQIL ASLQILSYVL HLCLLNPKNA FPTSDLLPAA QALHNNLRLF ESDSVLCLEI AGVCECWWKE GLVGRESLIS QSLPFLLSRS LTLKKKVDVH 0201: RVYMLREAFT LFDFEDESIE DLRMLLMRCV VSPLYVKTED GQRFVSFAFG LSRQLMKSGL AVVKAQIPLG SKSVLEGFGG ILFRAWKEVE LDLKGEIEDG 0301: FLQGIIDSAI HASSSAFAAS LRRVLGGFIS QRTSQGVEKL LFTLAEPMIF RSLQVANSNV RLNALHLLLD LFPMEDPDAT KEAKDTLLDK QFYLLEKLLS 0401: DECPDVRSVA VEGLSRVFYL FWEVIPSATI TKVLTKIFDD MSHESCSEVR LSTVNGITYL LANPQSHGIL KVILPRLGHL MLDSVTSVRV AMVDLLLLIR 0501: DVRAFQFNTV VSLDVLLSVL ASDQTHVAKG IARLLIPSYF PSRKRAEEAC QRCRTLINRN PKAGARFCEF LVSLGATVKS VLHLVGFFLN SVLSGDKLLE 0601: NQTEGLLRAA YYLCKDLVAD SGCMASLKEL LPGEKLKSLL AFAPTAQAQS SVIDIITMVS PDIVSEVLED CMNLVVNCGG LPSDAGRQTE LRSVHKLLLS 0701: SNAFCDLIGT FTSIMQKTAY RCQINFGYEV ERKNLQSMKR KKSKSSGKSS VRWKHVSGKN AISFEEDYLV AVGIAWQIKD LLTTEDARKS ILESDIEELL 0801: LSLKVVSHTS ILQATCCEYM DVNPDIMDQT MDHILVCTDE LFQAGDIGTP GTTSPEANLS KKPTTSNGNQ PKRRNRNARD DASEGSKEGG VLNKVKMLTA 0901: IFKFFVESTE MGLASNFQAS MFKFSSAYLK YVISIFNDHS TGKLEFEDAD MKEMILCTKS STSYAGKFIN LVMRHATEAS RPLFESFDLA NDLLDLFTMV 1001: EKSLGSAYAS RIVSALNPWI PDLVLALGPC FINNDSEESS YTSSFNHIKL CFPSWLLTCA KIELHEINKE DVTETSGFLA LKKLRNTIFT LVKGNTKVLD 1101: AIGYVLLLCL AVCIEKRDYS TALGLLHLVC VKLVGSEDRE WKELDTMLVL LPRIYPIIER EIGEGRDEDE VKTLEAAREL LQPVWMYHVY ETGRFHMMDE 1201: EEE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)