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AT1G31810.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.911
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31948069 (2020): endoplasmic reticulum
  • PMID:31541795 (2020): plasma membrane
  • PMID:30447334 (2019): plasma membrane
  • PMID:24134884 (2013): cytoskeleton microtubules
  • PMID:22318864 (2012): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Formin Homology 14
Curator
Summary (TAIR10)
Encodes the Type II Arabidopsis formin14. Interacts with microtubules and microfilaments to regulate cell division.
Computational
Description (TAIR10)
Formin Homology 14 (AFH14); FUNCTIONS IN: microtubule binding, actin binding, actin filament binding; INVOLVED IN: microsporogenesis; LOCATED IN: preprophase band, phragmoplast, spindle; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Actin-binding FH2 (InterPro:IPR015425), Tensin phosphatase, C2 domain (InterPro:IPR014020); BEST Arabidopsis thaliana protein match is: actin binding (TAIR:AT5G07740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:25302eggNOG:ENOG410IIBDeggNOG:ENOG410XT5ZEMBL:AC079041
EMBL:CP002684EnsemblPlants:AT1G31810EnsemblPlants:AT1G31810.1entrez:840068
Gene3D:3.90.190.10GeneID:840068Genevisible:Q9C6S1GO:GO:0003779
GO:GO:0004721GO:GO:0005819GO:GO:0008017GO:GO:0009524
GO:GO:0009556GO:GO:0009574GO:GO:0051015Gramene:AT1G31810.1
hmmpanther:PTHR23213hmmpanther:PTHR23213:SF190HOGENOM:HOG000029518InParanoid:Q9C6S1
IntAct:Q9C6S1InterPro:IPR000008InterPro:IPR014020InterPro:IPR015425
InterPro:IPR029021iPTMnet:Q9C6S1KEGG:ath:AT1G31810ncoils:Coil
OMA:CTEVLADPaxDb:Q9C6S1Pfam:PF02181Pfam:PF10409
Pfam:Q9C6S1Pfscan:PS51182Pfscan:PS51444PIR:G86441
PRIDE:Q9C6S1PRO:PR:Q9C6S1PROSITE:PS51181PROSITE:PS51182
PROSITE:PS51444ProteinModelPortal:Q9C6S1Proteomes:UP000006548RefSeq:NP_174461.3
SMART:SM00498SMART:SM01326SMR:Q9C6S1STRING:3702.AT1G31810.1
SUPFAM:SSF101447SUPFAM:SSF49562SUPFAM:SSF52799TAIR:AT1G31810
tair10-symbols:AFH14UniGene:At.48254UniGene:At.71094UniProt:Q9C6S1
Coordinates (TAIR10) chr1:-:11399922..11405761
Molecular Weight (calculated) 135522.00 Da
IEP (calculated) 6.95
GRAVY (calculated) -0.50
Length 1230 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSLLSRFFYK RPPDGLLEFA DRVYVFDSCF CTEVLADSLY QIFLHEVIND LHEEFPESSF LAFNFREGEK KSVFAETLCE YDVTVLEYPR QYEGCPMLPL
0101: SLIQHFLRVC ESWLARGNRQ DVILLHCERG GWPLLAFILA SFLIFRKVHS GERRTLEIVH REAPKGLLQL LSPLNPFPSQ LRYLQYVARR NINSEWPPPE
0201: RALSLDCVII RGIPNFDSQH GCRPIIRIFG RNYSSKSGLS TEMVYSMSDK KKPLRHYRQA ECDVIKIDIQ CWVQGDVVLE CVHMDLDPER EVMMFRVMFN
0301: TAFIRSNILM LNSDNLDILW EAKDHYPKGF RAEVLFGEVE NASPQKVPTP IVNGDETGGL PIEAFSRVQE LFSGVDLAEN GDDAALWLLK QLAAINDAKE
0401: FTRFRHKGSF YFNSPDSEEE TNTSSAADSS DEGFEAIQRP RIHIPFDNDD TDDITLSVAH ESSEEPHEFS HHHHHEIPAK DSVDNPLNLP SDPPSSGDHV
0501: TLLPPPPPPP PPPLFTSTTS FSPSQPPPPP PPPPLFMSTT SFSPSQPPPP PPPPPLFTST TSFSPSQPPP PPPLPSFSNR DPLTTLHQPI NKTPPPPPPP
0601: PPPLPSRSIP PPLAQPPPPR PPPPPPPPPS SRSIPSPSAP PPPPPPPPSF GSTGNKRQAQ PPPPPPPPPP TRIPAAKCAP PPPPPPPTSH SGSIRVGPPS
0701: TPPPPPPPPP KANISNAPKP PAPPPLPPSS TRLGAPPPPP PPPLSKTPAP PPPPLSKTPV PPPPPGLGRG TSSGPPPLGA KGSNAPPPPP PAGRGRASLG
0801: LGRGRGVSVP TAAPKKTALK PLHWSKVTRA AKGSLWADTQ KQENQPRAPE IDISELESLF SAVSDTTAKK STGRRGSSIS KPEKVQLVDL RRANNCEIML
0901: TKIKIPLPDM LSAVLALDSL ALDIDQVENL IKFCPTKEEM ELLRNYTGDK EMLGKCEQFF MELMKVPRIE AKLRVFGFKI TFASQVEELK SCLNTINAAT
1001: KEVKESAKLR QIMQTILTLG NALNQGTARG SAVGFKLDSL LKLSDTRARN NKMTLMHYLC KLVGEKMPEL LDFANDLVHL EAASKIELKT LAEEMQAATK
1101: GLEKVEQELM ASENDGAISL GFRKVLKEFL DMADEEVKTL ASLYSEVGRN ADSLSHYFGE DPARCPFEQV TKILTLFMKT FIKSREENEK QAEAEKKKLE
1201: KEAIKEKSAT KKDGVDNDND LIQQIHRHRT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)