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AT5G07740.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : actin binding
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
actin binding; FUNCTIONS IN: actin binding; INVOLVED IN: cellular component organization, actin cytoskeleton organization; EXPRESSED IN: shoot apex, stem; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Tensin phosphatase, C2 domain (InterPro:IPR014020), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: Actin-binding FH2 protein (TAIR:AT5G07770.1).
Protein Annotations
eggNOG:ENOG410ISMFeggNOG:ENOG41100UHEMBL:AB010070EMBL:CP002688
EnsemblPlants:AT5G07740EnsemblPlants:AT5G07740.1Genevisible:Q9FLQ7GO:GO:0004721
Gramene:AT5G07740.1hmmpanther:PTHR23213hmmpanther:PTHR23213:SF210HOGENOM:HOG000029518
InParanoid:Q9FLQ7InterPro:IPR000008InterPro:IPR014020InterPro:IPR015425
InterPro:IPR029021ncoils:CoilOMA:DVKDQFPPaxDb:Q9FLQ7
Pfam:PF02181Pfam:PF10409Pfam:Q9FLQ7Pfscan:PS51182
Pfscan:PS51444PRO:PR:Q9FLQ7PROSITE:PS51181PROSITE:PS51182
PROSITE:PS51444ProteinModelPortal:Q9FLQ7Proteomes:UP000006548SMART:SM00498
SMART:SM01326SUPFAM:SSF101447SUPFAM:SSF49562SUPFAM:SSF52799
TAIR:AT5G07740UniGene:At.9099UniProt:Q9FLQ7
Coordinates (TAIR10) chr5:-:2459076..2466580
Molecular Weight (calculated) 178157.00 Da
IEP (calculated) 7.35
GRAVY (calculated) -0.62
Length 1649 amino acids
Sequence (TAIR10)
(BLAST)
0001: MALFRRFFYK KPPDRLLEIS ERVYVFDCCF SSDVMGEDEY KVYLGGIVAQ LQDHFPEASF MVFNFREGEQ RSQISDVLSQ YDMTVMDYPR QYESCPLLPL
0101: EMIHHFLRSS ESWLSLEGQQ NVLLMHCERG GWPVLAFMLS GLLLYRKQYH GEQKTLEMVH KQAPKELLHL LSPLNPQPSQ LRYLQYISRR NLGSDWPPSD
0201: TPLLLDCLIL RDLPHFEGKK GCRPILRVYG QDPKARTNRS SILLFSTLKT KKHTRLYQQE ECILVKLDIQ CRVQGDVVLE CIHLHDDLVS EEMVFRIMFH
0301: TAFVRANILM LQRDEMDILW DVKDQFPKEF KAEVLFSGAD AVVPPITTST LSDDENDFDM TSPEEFFEVE EIFSDVIDGP DHKRDSDSFV VVDTASDDSE
0401: GKEVWKGDVE PNAFLDCASD DSNHKHDMHA ETSTDPVKDI TVDDVQYRSD GKADSNIDSV KDIGIDDGDE QRKRRTVEAK ENDSSTVQTQ SKGDEESNDL
0501: ESMSQKTNTS LNKPISEKPQ ATLRKQVGAN AKPAAAGDSL KPKSKQQETQ GPNVRMAKPN AVSRWIPSNK GSYKDSMHVA YPPTRINSAP ASITTSLKDG
0601: KRATSPDGVI PKDAKTKYLR ASVSSPDMRS RAPICSSPDS SPKETPSSLP PASPHQAPPP LPSLTSEAKT VLHSSQAVAS PPPPPPPPPL PTYSHYQTSQ
0701: LPPPPPPPPP FSSERPNSGT VLPPPPPPPP PFSSERPNSG TVLPPPPPPP LPFSSERPNS GTVLPPPPSP PWKSVYASAL AIPAICSTSQ APTSSPTPPP
0801: PPPAYYSVGQ KSSDLQTSQL PSPPPPPPPP PFASVRRNSE TLLPPPPPPP PPPFASVRRN SETLLPPPPP PPPWKSLYAS TFETHEACST SSSPPPPPPP
0901: PPFSPLNTTK ANDYILPPPP LPYTSIAPSP SVKILPLHGI SSAPSPPVKT APPPPPPPPF SNAHSVLSPP PPSYGSPPPP PPPPPSYGSP PPPPPPPPSY
1001: GSPPPPPPPP PGYGSPPPPP PPPPSYGSPP PPPPPPFSHV SSIPPPPPPP PMHGGAPPPP PPPPMHGGAP PPPPPPPMHG GAPPPPPPPP MHGGAPPPPP
1101: PPMFGGAQPP PPPPMRGGAP PPPPPPMRGG APPPPPPPMR GGAPPPPPPP MHGGAPPPPP PPMRGGAPPP PPPPGGRGPG APPPPPPPGG RAPGPPPPPG
1201: PRPPGGGPPP PPMLGARGAA VDPRGAGRGR GLPRPGFGSA AQKKSSLKPL HWVKVTRALQ GSLWDELQRH GESQTPSEFD VSEIETLFSA TVQKPADKSG
1301: SRRKSVGAKP EKVQLIDLRR ANNTEIMLTK VKMPLPDMMA AVLAMDESVL DVDQIENLIK FCPTKEEMEL LKNYTGDKTT LGKCEQYFLE LMKVPRVEAK
1401: LRVFSFKFQF GTQITEFKKS LNAVNSACEE VRSSQKLKEI MKKILYLGNT LNQGTARGAA VGFKLDSLSK LSDTRAANSK MTLMHYLCKV LASKASVLLD
1501: FPKDLESLES ASKIQLKSLA EEMQAIIKGL EKLNQELTAS ESDGPVSDVF RKTLGDFISV AETEVATVSS LYSVVGRNAD ALAHYFGEDP NRCPFEQVTA
1601: TLLNFIRLFK KAHEENVKQA ELEKKKALKE AEMEKAKGVN LTKKPVDDS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)