suba logo
AT1G61930.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
nucleus 0.869
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function, DUF584
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT1G11700.1); Has 322 Blast hits to 321 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 322; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZSKeggNOG:ENOG410YUXPEMBL:AC004392EMBL:AK230226EMBL:BT028990EMBL:CP002684EnsemblPlants:AT1G61930
EnsemblPlants:AT1G61930.1entrez:842488GeneID:842488Gramene:AT1G61930.1hmmpanther:PTHR33083hmmpanther:PTHR33083:SF11HOGENOM:HOG000238243
InterPro:IPR007608KEGG:ath:AT1G61930OMA:IWSPAVIPfam:PF04520PhylomeDB:O80698PIR:T02137Proteomes:UP000006548
RefSeq:NP_564788.1TAIR:AT1G61930UniGene:At.36352UniProt:O80698
Coordinates (TAIR10) chr1:+:22893218..22893829
Molecular Weight (calculated) 22250.60 Da
IEP (calculated) 4.79
GRAVY (calculated) -0.81
Length 203 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKGRKPTTM NRSDRYLGSY TYGDSHGNSV TDELELGEED IWSPAVIHDD TTENEESYGT WNLRATLGKN GRVGGLSLAF EGSLVAPPSS SPMIVQKIHG
101: GGGEGEEDRR KLASSAPVNV PDWSKIYRVD SVESIHELDD EDDEDEESGM MPPHEYLAKS QARRSRKIGG GGASVFDGVG RTLKGRELRR VRDAIWSQTG
201: FYG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)