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AT1G34065.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 0.974
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosylmethionine carrier 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosylmethionine carrier 2 (SAMC2); FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: S-adenosylmethionine carrier 1 (TAIR:AT4G39460.2); Has 26837 Blast hits to 14208 proteins in 451 species: Archae - 0; Bacteria - 2; Metazoa - 11303; Fungi - 7745; Plants - 4960; Viruses - 0; Other Eukaryotes - 2827 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4110BIIeggNOG:KOG0768EMBL:AC015446EMBL:AM260491EMBL:BT022098EMBL:CP002684EnsemblPlants:AT1G34065
EnsemblPlants:AT1G34065.1entrez:840304Gene3D:1.50.40.10GeneID:840304Genevisible:F4HT41GO:GO:0003735GO:GO:0006412
GO:GO:0016021GO:GO:0031969GO:GO:0055085Gramene:AT1G34065.1hmmpanther:PTHR24089hmmpanther:PTHR24089:SF369HOGENOM:HOG000038810
InParanoid:F4HT41InterPro:IPR002067InterPro:IPR018108InterPro:IPR023395iPTMnet:F4HT41KEGG:ath:AT1G34065KO:K15111
OMA:SALWKGMPaxDb:F4HT41Pfam:F4HT41Pfam:PF00153Pfscan:PS50920PIR:F86464PRIDE:F4HT41
PRINTS:PR00926PRO:PR:F4HT41PROSITE:PS50920ProteinModelPortal:F4HT41Proteomes:UP000006548RefSeq:NP_564436.4SMR:F4HT41
STRING:3702.AT1G34065.1SUPFAM:0048588SUPFAM:SSF103506TAIR:AT1G34065tair10-symbols:SAMC2TMHMM:TMhelixUniGene:At.49937
UniProt:F4HT41
Coordinates (TAIR10) chr1:-:12398717..12401036
Molecular Weight (calculated) 36885.00 Da
IEP (calculated) 9.18
GRAVY (calculated) 0.20
Length 345 amino acids
Sequence (TAIR10)
(BLAST)
001: MTKALSGFCC SLSLSTLVRS SSSHMDSDIV SSSIDRSQTA MPDALAFKSI NDPIKNQINS CAAICVKQDD PCHFLRVLYE SLITGGLAGV VVEAALYPID
101: TIKTRIQVAR DGGKIIWKGL YSGLGGNLVG VLPASALFFG VYEPTKQKLL KVLPDNLSAV AHLAAGALGG AVSSIVRVPT EVVKQRMQTG QFVSAPDAVR
201: LIIAKEGFGG MYAGYGSFLL RDLPFDALQF CVYEQLRIGY KLAARRDLND PENAMIGAFA GAVTGVLTTP LDVIKTRLMV QGSGTQYKGV SDCIKTIIRE
301: EGSSALWKGM GPRVLWIGIG GSIFFGVLEK TKQILSERSQ KSHNA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)