AT3G08980.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Peptidase S24/S26A/S26B/S26C family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I (InterPro:IPR000223); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G53530.1); Has 4114 Blast hits to 4113 proteins in 1108 species: Archae - 0; Bacteria - 2962; Metazoa - 240; Fungi - 231; Plants - 274; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:2741279..2742375 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 17327.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.84 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 154 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MGIQNILWQV AKKSFTGSII GLTISDRCCS VVPVRGDSMS PTFNPQRNSY LDDYVLVDKF CLKDYKFARG DVVVFSSPTH FGDRYIKRIV GMPGEWISSS 101: RDVIRVPEGH CWVEGDNKTS SLDSRSFGPI PLGLIQGRVT RVMWPPQRIS KIGR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)