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AT3G08980.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Peptidase S24/S26A/S26B/S26C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Peptidase S24/S26A/S26B/S26C family protein; FUNCTIONS IN: serine-type peptidase activity, peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro:IPR011056), Peptidase S24/S26A/S26B, conserved region (InterPro:IPR019759), Peptidase S24/S26A/S26B/S26C (InterPro:IPR015927), Peptidase S26A, signal peptidase I (InterPro:IPR000223); BEST Arabidopsis thaliana protein match is: Peptidase S24/S26A/S26B/S26C family protein (TAIR:AT1G53530.1); Has 4114 Blast hits to 4113 proteins in 1108 species: Archae - 0; Bacteria - 2962; Metazoa - 240; Fungi - 231; Plants - 274; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0681eggNOG:KOG1568EMBL:AC009326EMBL:AC010871
EMBL:BT025161EMBL:CP002686EnsemblPlants:AT3G08980EnsemblPlants:AT3G08980.1
entrez:820050Gene3D:2.10.109.10GeneID:820050GO:GO:0008236
GO:GO:0016020Gramene:AT3G08980.1hmmpanther:PTHR12383hmmpanther:PTHR12383:SF3
HOGENOM:HOG000003673InterPro:IPR000223InterPro:IPR015927InterPro:IPR019533
InterPro:IPR019759InterPro:IPR028360KEGG:ath:AT3G08980KO:K09648
MEROPS:S26.002merops:S26.012OMA:VLLEKFCPANTHER:PTHR12383
Pfam:PF00717Pfam:PF10502PhylomeDB:Q9S724PRINTS:PR00727
Proteomes:UP000006548RefSeq:NP_187510.1SMR:Q9S724STRING:3702.AT3G08980.1
SUPFAM:SSF51306TAIR:AT3G08980TIGRfam:TIGR02227TIGRFAMs:TIGR02227
UniGene:At.50161UniProt:Q9S724
Coordinates (TAIR10) chr3:+:2741279..2742375
Molecular Weight (calculated) 17327.00 Da
IEP (calculated) 9.84
GRAVY (calculated) -0.21
Length 154 amino acids
Sequence (TAIR10)
(BLAST)
001: MGIQNILWQV AKKSFTGSII GLTISDRCCS VVPVRGDSMS PTFNPQRNSY LDDYVLVDKF CLKDYKFARG DVVVFSSPTH FGDRYIKRIV GMPGEWISSS
101: RDVIRVPEGH CWVEGDNKTS SLDSRSFGPI PLGLIQGRVT RVMWPPQRIS KIGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)