AT1G09730.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Cysteine proteinases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 (InterPro:IPR003653); BEST Arabidopsis thaliana protein match is: Cysteine proteinases superfamily protein (TAIR:AT4G33620.1). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3148017..3154236 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 106018.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.11 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.65 | ||||||||||||||||||||||||||||||||||||||||
| Length | 931 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKKNFEVFDF KEEDELAESA AGKLLEKFTN PSPCNSPVLQ RQRIQSFCNE KRVEEEEMEG PSCAEPATAV ESDDHQCEDD STLVTEAKES RTILTFGLET 101: TDHLEETDAE HVNQGLMLGL KTEDLAKETD IDHDNHGLMF GLNSEDDIEE TDVDHRVESF SCQLGGNSFY AETSSYSQRQ LNSPFSDSSS SEEQIDMMSA 201: IDESLSDRSA LSEASDSEDD EEDWMTEHCF NDEEKIDLST AVIMTSEYVI LKDMHCAASL VIFSCNGIKI KSFLANNEEV PFSCEFGVED IVSIQYNWYQ 301: NVGLIILRIR VLLKDENCHE DMEELKIAVK EHNWPNKQQK INSLHVKYPA VWNTDLEDDV EVSGYNLNQQ KRYFPSFDEP FEDVVYPKGD PDAVSICKRD 401: VELLQPETFV NDTIIDFYIN YLKNQIQTEE KHRFHFFNSF FFRKLADLDK DPSSIADGKA AFLRVRKWTR KVDMFGKDYI FVPVNYNLHW SLIVICHPGE 501: VANRTDLDLD DSKKVPCILH MDSIKGSHAG LKNLVQTYLC EEWKERHKET SDDISSRFMN LRFVSLELPQ QENSFDCGLF LLHYLELFLA EAPLNFSPFK 601: IYNASNFLYL NWFPPAEASL KRTLIQKLIF ELLENRSREV SNEQNQSCES PVAVNDDMGI EVLSERCSPL IDCNGDMTQT QDDQGIEMTL LERSSMRHIQ 701: AANDSGMVLR DLFDSGSNNT GSLLEQLQQP FEDPSSFYHL SNDSSAREQV DMETGEQFMC LNAGEGNFQC ITETTSPRAS NSFSSWNLGI PLVQKEDETD 801: LLSETSNSSN DSIGIIEDNP IENTHEEEID ESPPRETVSL KSATVGSNTA DHTTENEEPV STHIELVVPS SQNDRDEEKP LEHDLEIGDK TSEDVGDDCD 901: QKEPMEEEDE KRAAKRPRLS SPTGEAEEME K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)