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AT1G01510.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction.
Computational
Description (TAIR10)
ANGUSTIFOLIA (AN); CONTAINS InterPro DOMAIN/s: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (InterPro:IPR006140), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: D-isomer specific 2-hydroxyacid dehydrogenase family protein (TAIR:AT1G12550.1); Has 20556 Blast hits to 20427 proteins in 2617 species: Archae - 372; Bacteria - 13694; Metazoa - 624; Fungi - 929; Plants - 529; Viruses - 5; Other Eukaryotes - 4403 (source: NCBI BLink).
Protein Annotations
BioGrid:24636eggNOG:COG1052eggNOG:ENOG410IRIJEMBL:AB032060EMBL:AC061957EMBL:AY059829EMBL:BT000155
EMBL:CP002684EMBL:Y10086EMBL:Y12776EnsemblPlants:AT1G01510EnsemblPlants:AT1G01510.1entrez:839401Gene3D:3.40.50.720
GeneID:839401Genevisible:O23702GO:GO:0000226GO:GO:0003714GO:GO:0005802GO:GO:0005829GO:GO:0005874
GO:GO:0008360GO:GO:0009965GO:GO:0010091GO:GO:0010482GO:GO:0031129GO:GO:0042802GO:GO:0042803
GO:GO:0042814GO:GO:0045604GO:GO:0048444GO:GO:0048530GO:GO:0051287GO:GO:0055114GO:GO:1903507
GO:GO:2000039Gramene:AT1G01510.1hmmpanther:PTHR10996hmmpanther:PTHR10996:SF134HOGENOM:HOG000030751InParanoid:O23702IntAct:O23702
InterPro:IPR006140InterPro:IPR016040iPTMnet:O23702KEGG:ath:AT1G01510OMA:QNSVSRTPaxDb:O23702Pfam:O23702
Pfam:PF02826PhylomeDB:O23702PIR:G86145PRIDE:O23702PRO:PR:O23702ProteinModelPortal:O23702Proteomes:UP000006548
RefSeq:NP_563629.1SMR:O23702STRING:3702.AT1G01510.1SUPFAM:SSF51735SUPFAM:SSF52283TAIR:AT1G01510tair10-symbols:AN
UniGene:At.214UniProt:O23702
Coordinates (TAIR10) chr1:+:187235..189836
Molecular Weight (calculated) 70153.60 Da
IEP (calculated) 6.57
GRAVY (calculated) -0.30
Length 636 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKIRSSATM PHRDQPSPAS PHVVTLNCIE DCALEQDSLA GVAGVEYVPL SRIADGKIES ATAVLLHSLA YLPRAAQRRL RPHQLILCLG SADRAVDSTL
101: AADLGLRLVH VDTSRAEEIA DTVMALILGL LRRTHLLSRH ALSASGWLGS LQPLCRGMRR CRGMVLGIVG RSVSARYLAS RSLAFKMSVL YFDVPEGDEE
201: RIRPSRFPRA ARRMDTLNDL LAASDVISLH CALTNDTVQI LNAECLQHIK PGAFLVNTGS CQLLDDCAVK QLLIDGTIAG CALDGAEGPQ WMEAWVKEMP
301: NVLILPRSAD YSEEVWMEIR EKAISILHSF FLDGVIPSNT VSDEEVEESE ASEEEEQSPS KHEKLAIVES TSRQQGESTL TSTEIVRREA SELKESLSPG
401: QQHVSQNTAV KPEGRRSRSG KKAKKRHSQQ KYMQKTDGSS GLNEESTSRR DDIAMSDTEE VLSSSSRCAS PEDSRSRKTP LEVMQESSPN QLVMSSKKFI
501: GKSSELLKDG YVVALYAKDL SGLHVSRQRT KNGGWFLDTL SNVSKRDPAA QFIIAYRNKD TVGLRSFAAG GKLLQINRRM EFVFASHSFD VWESWSLEGS
601: LDECRLVNCR NSSAVLDVRV EILAMVGDDG ITRWID
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)