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AT5G64790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-Glycosyl hydrolases family 17 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT3G04010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G64790-MONOMERCAZy:CBM43CAZy:GH17eggNOG:ENOG410IF05
eggNOG:ENOG410YBX5EMBL:AB019236EMBL:CP002688EnsemblPlants:AT5G64790
EnsemblPlants:AT5G64790.1entrez:836600Gene3D:3.20.20.80GeneID:836600
GO:GO:0004553GO:GO:0005975GO:GO:0016021GO:GO:0031225
Gramene:AT5G64790.1hmmpanther:PTHR32227hmmpanther:PTHR32227:SF53HOGENOM:HOG000238221
InterPro:IPR000490InterPro:IPR012946InterPro:IPR013781InterPro:IPR017853
KEGG:ath:AT5G64790OMA:HDHGAPFPfam:PF00332Pfam:PF07983
PhylomeDB:Q9LV98PROSITE:PS00587Proteomes:UP000006548RefSeq:NP_201284.1
scanprosite:PS00587SMART:SM00768SMR:Q9LV98STRING:3702.AT5G64790.1
SUPFAM:SSF51445TAIR:AT5G64790TMHMM:TMhelixUniGene:At.50557
UniProt:Q9LV98
Coordinates (TAIR10) chr5:+:25902713..25904559
Molecular Weight (calculated) 53924.90 Da
IEP (calculated) 5.87
GRAVY (calculated) -0.09
Length 485 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGRAAMLVN VGTVIMTVLT LASLVGGFGV NWGNIASHPL NPNIVVQMLK DNKINKVKLF DADSWTMNAL AGTGMEVMVG IPNNLLESLA DDYDNAKDWV
101: KENVTQYIRK GGVDIKYVAV GNEPFLSAYN GSFLKTTFPA LKNIHKALKE AGHTNIMKAT IPQNAEVYQS ANDKPSEGDF RKDVKQTMLD IVNFFHENDL
201: PFTVNIYPFL SLYLNEHFPV EFAFLDGDGQ TMTDKGKNYD NVFDANYDTL VYALKKAGIH DMKIIVGEVG WPTDGHKYAS PKLAEKFYAG LMKRLAKDGG
301: TPTRPERLEV YLFGFLDEDM KSILPGPFER HWGIFRYDGT PKFMLDFTGQ GRQMVPVAAK GVQYLEKQWC VVNKDTVNLD EVGPDLDYAC YHGDCTAMEA
401: GSTCSKLTKV QNISYAFNMY FQIQDQDVRA CDFKGAAMIT KVNASVGSCL FPVQIVSGSD DFRINFVFGR FVVFGLVLLG LLTVI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)