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AT5G04180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha carbonic anhydrase 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha carbonic anhydrase 3 (ACA3); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: response to carbon dioxide, one-carbon metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 4 (TAIR:AT4G20990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G04180-MONOMEREC:4.2.1.1eggNOG:COG3338eggNOG:KOG0382
EMBL:AK221569EMBL:AL391716EMBL:AY088872EMBL:CP002688
EMBL:DQ446916EMBL:DQ653263EnsemblPlants:AT5G04180EnsemblPlants:AT5G04180.1
entrez:830296Gene3D:3.10.200.10GeneID:830296Genevisible:Q9FYE3
GO:GO:0004089GO:GO:0009570GO:GO:0010037GO:GO:0046872
Gramene:AT5G04180.1gramene_pathway:1.6.5.4gramene_pathway:PWY-2261hmmpanther:PTHR18952
hmmpanther:PTHR18952:SF111HOGENOM:HOG000112636InParanoid:Q9FYE3InterPro:IPR001148
InterPro:IPR023561KEGG:ath:AT5G04180KO:K01674OMA:ETETEFH
PANTHER:PTHR18952PaxDb:Q9FYE3Pfam:PF00194Pfam:Q9FYE3
Pfscan:PS51144PhylomeDB:Q9FYE3PRIDE:Q9FYE3PRO:PR:Q9FYE3
PROSITE:PS51144ProteinModelPortal:Q9FYE3Proteomes:UP000006548Reactome:R-ATH-1237044
Reactome:R-ATH-1247673Reactome:R-ATH-1475029RefSeq:NP_196038.1SMART:SM01057
SMR:Q9FYE3STRING:3702.AT5G04180.1SUPFAM:SSF51069TAIR:AT5G04180
tair10-symbols:ACA3tair10-symbols:ATACA3UniGene:At.19699UniGene:At.63762
UniProt:Q9FYE3
Coordinates (TAIR10) chr5:-:1147907..1149237
Molecular Weight (calculated) 31399.70 Da
IEP (calculated) 7.75
GRAVY (calculated) -0.41
Length 277 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTIILFVTF LALSSSSLAD ETETEFHYKP GEIADPSKWS SIKAEWKICG TGKRQSPINL TPKIARIVHN STEILQTYYK PVEAILKNRG FDMKVKWEDD
101: AGKIVINDTD YKLVQSHWHA PSEHFLDGQR LAMELHMVHK SVEGHLAVIG VLFREGEPNA FISRIMDKIH KIADVQDGEV SIGKIDPREF GWDLTKFYEY
201: RGSLTTPPCT EDVMWTIINK VGTVSREQID VLTDARRGGY EKNARPAQPL NGRLVYLNEQ SSPSPTPRLR IPRVGPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)