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AT5G58530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Glutaredoxin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glutaredoxin family protein; FUNCTIONS IN: electron carrier activity, protein disulfide oxidoreductase activity; INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutaredoxin (InterPro:IPR002109), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutaredoxin family protein (TAIR:AT5G13810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111HAIeggNOG:KOG2824EMBL:AB025632EMBL:AK117206
EMBL:BT005273EMBL:CP002688EnsemblPlants:AT5G58530EnsemblPlants:AT5G58530.1
entrez:835966Gene3D:3.40.30.10GeneID:835966GO:GO:0005623
GO:GO:0009055GO:GO:0015035GO:GO:0045454Gramene:AT5G58530.1
hmmpanther:PTHR10168hmmpanther:PTHR10168:SF68HOGENOM:HOG000238426IntAct:Q9FGG8
InterPro:IPR002109InterPro:IPR012336KEGG:ath:AT5G58530KO:K17479
OMA:IHDTYSPPfam:PF00462Pfscan:PS51354PhylomeDB:Q9FGG8
PROSITE:PS51354Proteomes:UP000006548RefSeq:NP_200661.1SMR:Q9FGG8
STRING:3702.AT5G58530.1SUPFAM:SSF52833TAIR:AT5G58530UniGene:At.29274
UniProt:Q9FGG8
Coordinates (TAIR10) chr5:+:23660428..23661249
Molecular Weight (calculated) 30678.50 Da
IEP (calculated) 9.40
GRAVY (calculated) -0.62
Length 273 amino acids
Sequence (TAIR10)
(BLAST)
001: MWRPWRKSSV KIHDTYSPTT ASFKDIHHLC SDDSPSFPSS PSPSPKTASR VFHRVRAANL ILKSWPTRQS NHLLRADSEP INLSRNQNPE SDSKQSKTKT
101: EPDVRISIPG AEKSIVVYFT SLRVVRPTFE ACKSVTSILH SFPVRIDERD LSMDASFSTE LQRIFGKDQN QNQNQAKTPK LPRVFIGGRY IGGAEEVKQL
201: HEIGELKKLV QELPKIEPGV CEMCGGHRFV PCKDCHGSHK VHTEKLGFRT CLTCNENGLV RCSSCSFPQS PPP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)