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AT5G19980.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
ASURE: golgi
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:15480787 (2004): Golgi Golgi apparatus Golgi membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : golgi nucleotide sugar transporter 4
Curator
Summary (TAIR10)
Encodes a Golgi-localized nucleotide-sugar transporter.
Computational
Description (TAIR10)
golgi nucleotide sugar transporter 4 (GONST4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: golgi nucleotide sugar transporter 3 (TAIR:AT1G76340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ISB0eggNOG:ENOG410XP3XEMBL:AF296836EMBL:AJ551327EMBL:BT024734EMBL:CP002688EnsemblPlants:AT5G19980
EnsemblPlants:AT5G19980.1entrez:832120GeneID:832120Genevisible:Q84L08GO:GO:0000139GO:GO:0005794GO:GO:0008643
GO:GO:0015780GO:GO:0016021Gramene:AT5G19980.1hmmpanther:PTHR11132hmmpanther:PTHR11132:SF93HOGENOM:HOG000242633InParanoid:Q84L08
InterPro:IPR004853InterPro:IPR029663iPTMnet:Q84L08KEGG:ath:AT5G19980OMA:ITSEMVYPANTHER:PTHR11132:SF93PaxDb:Q84L08
Pfam:PF03151Pfam:Q84L08PhylomeDB:Q84L08PRIDE:Q84L08PRO:PR:Q84L08ProteinModelPortal:Q84L08Proteomes:UP000006548
RefSeq:NP_197498.1STRING:3702.AT5G19980.1TAIR:AT5G19980tair10-symbols:GONST4TMHMM:TMhelixUniGene:At.20906UniProt:Q84L08
Coordinates (TAIR10) chr5:-:6749907..6750932
Molecular Weight (calculated) 37387.70 Da
IEP (calculated) 7.40
GRAVY (calculated) 0.62
Length 341 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSSRFDSNK QLTTSSLVIG YALCSSLLAV INKLAITYFN YPGLLTALQY LTCTVAVYLL GKSGLINHDP FTWDTAKKFL PAAIVFYLAI FTNTNLLRHA
101: NVDTFIVFRS LTPLLVAIAD TVFRSQPLPS RLTFLSLVVI LAGAVGYVAT DSSFTLTAYS WALAYLVTIT TEMVYIKHMV SNIKLNIWGL VLYNNLLSLM
201: IAPVFWFLTG EFTEVFAALS ENRGNLFEPY AFSSVAASCV FGFLISYFGF AARNAISATA FTVTGVVNKF LTVVINVLIW DKHATPVGLV CLLFTICGGV
301: GYQQSVKLDK PIEKVSEKDS EKGEEDEELT QLVPGKLASV V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)