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AT5G18280.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : apyrase 2
Curator
Summary (TAIR10)
Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.
Computational
Description (TAIR10)
apyrase 2 (APY2); CONTAINS InterPro DOMAIN/s: Nucleoside phosphatase GDA1/CD39 (InterPro:IPR000407); BEST Arabidopsis thaliana protein match is: apyrase 1 (TAIR:AT3G04080.1); Has 1437 Blast hits to 1429 proteins in 222 species: Archae - 0; Bacteria - 35; Metazoa - 609; Fungi - 299; Plants - 361; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G18280-MONOMERBioCyc:ARA:GQT-2442-MONOMEREC:3.6.1.5EMBL:AB012246EMBL:AF141671EMBL:AF156783EMBL:AY099866
EMBL:AY140045EMBL:BT000329EMBL:CP002688EMBL:JQ937238EnsemblPlants:AT5G18280EnsemblPlants:AT5G18280.1entrez:831946
ExpressionAtlas:Q0WLD2ExpressionAtlas:Q9SPM5GeneID:831946Genevisible:Q9SPM5GO:GO:0000139GO:GO:0005524GO:GO:0016021
GO:GO:0016787Gramene:AT5G18280.1hmmpanther:PTHR11782hmmpanther:PTHR11782:SF50HOGENOM:HOG000220904InParanoid:Q9SPM5InterPro:IPR000407
iPTMnet:Q9SPM5PANTHER:PTHR11782Pfam:PF01150Pfam:Q9SPM5PhylomeDB:Q9SPM5PRIDE:Q9SPM5PRO:PR:Q9SPM5
PROSITE:PS01238ProteinModelPortal:Q9SPM5Proteomes:UP000006548RefSeq:NP_197329.4scanprosite:PS01238SMR:Q9SPM5STRING:3702.AT5G18280.2
TAIR:AT5G18280tair10-symbols:APY2tair10-symbols:ATAPY2TMHMM:TMhelixUniGene:At.19874UniProt:Q0WLD2UniProt:Q9SPM5
Coordinates (TAIR10) chr5:-:6050799..6054875
Molecular Weight (calculated) 62920.00 Da
IEP (calculated) 7.18
GRAVY (calculated) -0.25
Length 578 amino acids
Sequence (TAIR10)
(BLAST)
001: MLNIVGSYPS PAIVTHNVFC LHPSLSHTKF RSEAHTSFGF QIKSGDSSRF PKFTVDLEPL QDPPQTTASS GTGNGNGKIR YRSPSSTELL ESGNHSPTSD
101: SVDGGKMTAK RGIGRHESLA DKIQRHRGII LVISVPIVLI GLVLLLMPGR SISDSVVEEY SVHNRKGGPN SRGPKNYAVI FDAGSSGSRV HVYCFDQNLD
201: LIPLGNELEL FLQLKPGLSA YPTDPRQAAN SLVSLLDKAE ASVPRELRPK THVRVGATAG LRTLGHDASE NILQAVRELL RDRSMLKTEA NAVTVLDGTQ
301: EGSYQWVTIN YLLRNLGKPY SDTVGVVDLG GGSVQMAYAI SEEDAASAPK PLEGEDSYVR EMYLKGRKYF LYVHSYLHYG LLAARAEILK VSEDSENPCI
401: VAGYDGMYKY GGKEFKAPAS QSGASLDECR RITINALKVN DTLCTHMKCT FGGVWNGGRG GGQKNMFVAS FFFDRAAEAG FVDPKQPVAT VRPMDFEKAA
501: KKACSMKLEE GKSTFPLVEE ENLPYLCMDL VYQYTLLIDG FGLEPSQTIT LVKKVKYGDQ AVEAAWPLGS AIEAVSSP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)