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AT5G07030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi
  • PMID:25852701 (2015): extracellular region apoplast
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21109274 (2011): extracellular region
  • PMID:19334764 (2009): plasma membrane
  • PMID:16729891 (2006): extracellular region
  • PMID:16356755 (2006): extracellular region
  • PMID:15593128 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase aspartic (InterPro:IPR021109), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT3G54400.1); Has 3400 Blast hits to 3386 proteins in 327 species: Archae - 0; Bacteria - 0; Metazoa - 917; Fungi - 461; Plants - 1890; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:CP002688EnsemblPlants:AT5G07030
EnsemblPlants:AT5G07030.1entrez:830594Gene3D:2.40.70.10GeneID:830594
GO:GO:0004190GO:GO:0005618GO:GO:0009505Gramene:AT5G07030.1
hmmpanther:PTHR13683hmmpanther:PTHR13683:SF258InParanoid:F4K5B9InterPro:IPR001461
InterPro:IPR021109InterPro:IPR032799InterPro:IPR032861InterPro:IPR033121
iPTMnet:F4K5B9KEGG:ath:AT5G07030MEROPS:A01.A54OMA:YEAVRNE
PANTHER:PTHR13683PaxDb:F4K5B9Pfam:PF14541Pfam:PF14543
Pfscan:PS51767PRIDE:F4K5B9PROSITE:PS51767ProteinModelPortal:F4K5B9
Proteomes:UP000006548RefSeq:NP_196320.2SMR:F4K5B9STRING:3702.AT5G07030.1
SUPFAM:SSF50630TAIR:AT5G07030TMHMM:TMhelixUniGene:At.22613
UniGene:At.72962UniProt:F4K5B9
Coordinates (TAIR10) chr5:-:2183600..2185717
Molecular Weight (calculated) 48696.90 Da
IEP (calculated) 10.06
GRAVY (calculated) 0.02
Length 455 amino acids
Sequence (TAIR10)
(BLAST)
001: MPTPFNNPSN PKAYNTMSTL VLFLQLFSIL PLALGLNHPN CDLTKTQDQG STLRIFHIDS PCSPFKSSSP LSWEARVLQT LAQDQARLQY LSSLVAGRSV
101: VPIASGRQML QSTTYIVKAL IGTPAQPLLL AMDTSSDVAW IPCSGCVGCP SNTAFSPAKS TSFKNVSCSA PQCKQVPNPT CGARACSFNL TYGSSSIAAN
201: LSQDTIRLAA DPIKAFTFGC VNKVAGGGTI PPPQGLLGLG RGPLSLMSQA QSIYKSTFSY CLPSFRSLTF SGSLRLGPTS QPQRVKYTQL LRNPRRSSLY
301: YVNLVAIRVG RKVVDLPPAA IAFNPSTGAG TIFDSGTVYT RLAKPVYEAV RNEFRKRVKP TTAVVTSLGG FDTCYSGQVK VPTITFMFKG VNMTMPADNL
401: MLHSTAGSTS CLAMAAAPEN VNSVVNVIAS MQQQNHRVLI DVPNGRLGLA RERCS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)