suba logo
AT4G32410.1
Subcellular Consensus
(Prediction and Experimental)

min: heatmap :max

.
SUBAcon:
golgi 0.500
plasma membrane 0.500
ASURE: golgi,plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25641898 (2015): plasma membrane
  • PMID:25122472 (2014): Golgi Golgi apparatus
  • PMID:22923678 (2012): Golgi
  • PMID:22430844 (2012): Golgi
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:17317660 (2007): plasma membrane
  • PMID:16618929 (2006): Golgi
  • PMID:15308754 (2004): plasma membrane
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cellulose synthase 1
Curator
Summary (TAIR10)
Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.
Computational
Description (TAIR10)
cellulose synthase 1 (CESA1); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: primary cell wall biogenesis, cellulose biosynthetic process, plant-type cell wall biogenesis, hyperosmotic salinity response; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: cellulose synthase 10 (TAIR:AT2G25540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EC:2.4.1.12eggNOG:COG1215eggNOG:ENOG410IIG9EMBL:AL161581EMBL:CP002687EMBL:KJ138727EnsemblPlants:AT4G32410
EnsemblPlants:AT4G32410.1entrez:829376ExpressionAtlas:W8PUJ0Gene3D:3.30.40.10GeneID:829376GO:GO:0005886GO:GO:0008270
GO:GO:0016021GO:GO:0016760GO:GO:0030244GO:GO:0071555Gramene:AT4G32410.1gramene_pathway:2.4.1.12gramene_pathway:PWY-1001
hmmpanther:PTHR13301hmmpanther:PTHR13301:SF33InterPro:IPR005150InterPro:IPR013083InterPro:IPR027934InterPro:IPR029044KEGG:00500+2.4.1.12
KEGG:ath:AT4G32410KO:K10999ncoils:CoilOMA:NEFNYTQPaxDb:W8PUJ0Pfam:O48946Pfam:PF03552
Pfam:PF14569PhylomeDB:W8PUJ0ProteinModelPortal:W8PUJ0RefSeq:NP_194967.1SMR:W8PUJ0STRING:3702.AT4G32410.1SUPFAM:SSF53448
SUPFAM:SSF57850tair10-symbols:AtCESA1tair10-symbols:CESA1tair10-symbols:RSW1TMHMM:TMhelixUniGene:At.21246UniPathway:UPA00695
UniProt:O48946UniProt:W8PUJ0
Coordinates (TAIR10) chr4:-:15641009..15646388
Molecular Weight (calculated) 122243.00 Da
IEP (calculated) 6.94
GRAVY (calculated) -0.24
Length 1081 amino acids
Sequence (TAIR10)
(BLAST)
0001: MEASAGLVAG SYRRNELVRI RHESDGGTKP LKNMNGQICQ ICGDDVGLAE TGDVFVACNE CAFPVCRPCY EYERKDGTQC CPQCKTRFRR HRGSPRVEGD
0101: EDEDDVDDIE NEFNYAQGAN KARHQRHGEE FSSSSRHESQ PIPLLTHGHT VSGEIRTPDT QSVRTTSGPL GPSDRNAISS PYIDPRQPVP VRIVDPSKDL
0201: NSYGLGNVDW KERVEGWKLK QEKNMLQMTG KYHEGKGGEI EGTGSNGEEL QMADDTRLPM SRVVPIPSSR LTPYRVVIIL RLIILCFFLQ YRTTHPVKNA
0301: YPLWLTSVIC EIWFAFSWLL DQFPKWYPIN RETYLDRLAI RYDRDGEPSQ LVPVDVFVST VDPLKEPPLV TANTVLSILS VDYPVDKVAC YVSDDGSAML
0401: TFESLSETAE FAKKWVPFCK KFNIEPRAPE FYFAQKIDYL KDKIQPSFVK ERRAMKREYE EFKVRINALV AKAQKIPEEG WTMQDGTPWP GNNTRDHPGM
0501: IQVFLGHSGG LDTDGNELPR LIYVSREKRP GFQHHKKAGA MNALIRVSAV LTNGAYLLNV DCDHYFNNSK AIKEAMCFMM DPAIGKKCCY VQFPQRFDGI
0601: DLHDRYANRN IVFFDINMKG LDGIQGPVYV GTGCCFNRQA LYGYDPVLTE EDLEPNIIVK SCCGSRKKGK SSKKYNYEKR RGINRSDSNA PLFNMEDIDE
0701: GFEGYDDERS ILMSQRSVEK RFGQSPVFIA ATFMEQGGIP PTTNPATLLK EAIHVISCGY EDKTEWGKEI GWIYGSVTED ILTGFKMHAR GWISIYCNPP
0801: RPAFKGSAPI NLSDRLNQVL RWALGSIEIL LSRHCPIWYG YHGRLRLLER IAYINTIVYP ITSIPLIAYC ILPAFCLITD RFIIPEISNY ASIWFILLFI
0901: SIAVTGILEL RWSGVSIEDW WRNEQFWVIG GTSAHLFAVF QGLLKVLAGI DTNFTVTSKA TDEDGDFAEL YIFKWTALLI PPTTVLLVNL IGIVAGVSYA
1001: VNSGYQSWGP LFGKLFFALW VIAHLYPFLK GLLGRQNRTP TIVIVWSVLL ASIFSLLWVR INPFVDANPN ANNFNGKGGV F
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)