AT4G24680.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : modifier of snc1 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 regulates the expression of SNC1, a TIR-NB-LRR-type of R protein. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
MODIFIER OF snc1 (MOS1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of gene expression, epigenetic; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; Has 5806 Blast hits to 4291 proteins in 546 species: Archae - 8; Bacteria - 946; Metazoa - 2312; Fungi - 705; Plants - 202; Viruses - 15; Other Eukaryotes - 1618 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:12733425..12739737 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 155380.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.89 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.23 | ||||||||||||||||||||||||||||||||||||||||
| Length | 1427 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MTSSTTGDRS RWGTTRRSGM TILGKVAVPK PINLPSQRLE NQGLDPNVEI VPKGTLSWGS KSSLNAWGTS SLSPRTESGP GSPSHLSNRP SSGGSVTRPS 0101: TADSNKAHDS SSSVAWDSNS RPSSASGVFP SNQPSVALQR PHSADTRPGS SQLSRFAEPV SETSATWGQH VAPEKLGVAP SKNDGFSLTS GDFPSLGAEK 0201: DTSEKSTRPQ GDTLDMALRN YKFADAGPHA RPPSSSGRSV EGQGVDCTEE ANDRIGDANS WRRENQPYSE DAPRHCREEG QLDSRGSQSY PNANFPPRYD 0301: AWRGPPVNNH QGGGWYGGNH PYGAPMGPGG FHMDPFPFYP TQVPPAPGHG AGPRGNHANN ERMFRPPMLD SYVHPRMQTR PGFYVGPAPH EGYYGPPMGY 0401: GSPSNRDLPF AGRPTGPHAY NNHSGQGGYD TPGSSVSLER NESSHSQETQ RPYKVLLKHQ DGRFGEDNAK REEFLGNRLP NAEKIAQQMQ TSRNERREIR 0501: NDASGEVQPV KAELAAPGDP SLIQKIEGLN AKTRTNDGWQ NSSSVVNRDE QESQPRTLNS GNSANKVSAR NHRTGHASDS KNSSHYNQGD SATNKNAEPA 0601: AMGGTSIFRR PTQQTQGRAD PQTKRIVNSE GNDAWQKTTV MSGSSHTTLA TNTESFREVN VDDSLDTESI RRPGSGISAD PKDNQRSTMR ELARQRAQQR 0701: QKEEEERARD QRAKALAKLE ELNRRSQIYE EGSVKNMEAA SNASPADMPT DPGSHSSNAT NSVEPTGGSG KNTTQNTRTS TEYANNVGPS QQDNLPRDGG 0801: ASKQKRLGYK QKQNIIFEKK PTGSSVATAE VFDVVPSPEV VNEGVSSNNS DMPATSTVSA ESTFPKRKNN RNGKKKHKAE ETATMNTTRV AVGKETKSGD 0901: ESIETARARA AEIELGSVSV PSLDIKVSGD SSEQISSFTN EESQNRAKNN WKSQHVRRTQ RNSLVNKPAE KFSGNNAVIW APVHPQQKAD VSTGGGSQTT 1001: VPEFGTSSKS QHQGQTSSKS KRVEIERYVP KPIVKEMAEQ IVSKNLVTSA PDMSENVNQK ENRGGEGTGI LQPSGSTAGK SGSPSKSRHG NGRQGKHGRE 1101: HASWHQRGSG APTKALEDGQ FVTSNQPIRG TVNYHSSKQT EQIAAKDQTT CNKDGWNDGW YMTPETHYSA AEEMESSAVG KDQGMSMHGR QHASRSNKDG 1201: GSNYGDPKKG NKRDFNKAHT QHSGHGFSQP DLPAASKEGR VPGDHVWHTA NRTGKYGGRE STRDKPYGSQ EKNVVGYEHQ GFTTEQKTTS ADTQAQLQNR 1301: STNKEVQVEQ NPNSMFQKNT GQGRRFGRGQ ESQGGWGLPA QENMHHHHQR PPSNRDRQKQ NLHYEYKPVG SHTYDGERSR EQSKESSQTE GPRYREKGQG 1401: QQRQGGYQQQ RGTSGRNGGH GFTGDRN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)