AT4G10930.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:6705178..6708846 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 108077.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.64 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||||||||||||||
| Length | 984 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METQPDTSLM ETRKSLDISE KTNSGCSVEA VYSGNFSVTV ADDGETALVV SIVKGDESHM GPSDTNPLPV QAKMDGDPDS SHLKILCREE NTEQVAVKSE 101: LNQSLPHDIS SRLSSDSDQP FFAADIENRA DPVVEKDCLS IDDKKNLSTA AISNSDVASV ISLKRKHSDC SGDDGNSETK PEIYESLNEL KLEEEEELTT 201: VHHESRSPSN NTTVDIFSIV KGTGRRKNLM RSNPTDKSSE AENAAGLRVK KIKRTPEDEK ESMVLVEKLR KEIREAVRNK SMEDIRENQF DPKLLAAFRA 301: AVAGPKTGEA PRRSSALAVK AKKLMLQKGK VRENLTKKIY ADLNGKRKSA WHRDCEVEFW KHRCIQGRKP EKIETLKSVL SLLKNKPADT KTNFSSETPQ 401: ASNPILSRLY LADTSVFPRN DNLKPLLAPK EMGNSQNNGK PTEASKTLPK ISAAKGSSVK AAGSKLNSGN KQSDGQPNLT SSNSKEMVEN PDDLKKDKRK 501: WALQVLARKK ALAGNNSTQD KEGSPELKGN YPLLAQLPAD MRPSLATSRH NKVPVAVRQT QLYRLTEHLL KKENLLTIRR SAATELAVAD AINIEKAIAD 601: KSSSKVVYLN LCSQEILHHS ESKTMDNAVE PNSSSPMADS ESERISSKDS DNPAVLEALR AAGLADSPPN SPTRSVEVLP EKGDSSLDKT RETGPYNVFD 701: MDSVPDTDIF GDFEYELDEE DYFGATMAKK ASVMQPDESL TKVKVVLSTV QPGKSLNPSE VVEDEETTTE NLNETTNGKE DGKSFVPMEL VPEAEGEGEG 801: EGEGEGEGEG GGEILSVAEC EELYGPGTEK LVERPLIEGF AENGVKAKAP DSECESNTQR EFIASNFEIT CIQEKKLPRS IQKCKPSEKP SKEEKGKADG 901: FGNSITKKVE AYIKEHIRPL CKSGVINVEQ YRWAVTKTTE KVMKYHSKAK SANFLIKEGD KIKKLAEQYV ETASSGAHHK DKCK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)