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AT3G60680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant protein of unknown function (DUF641)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant protein of unknown function (DUF641); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF641, plant (InterPro:IPR006943); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF641) (TAIR:AT2G45260.1); Has 309 Blast hits to 304 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 2; Plants - 284; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IQRZeggNOG:ENOG410YCFQEMBL:AK117228EMBL:AL162295
EMBL:BT005890EMBL:CP002686EnsemblPlants:AT3G60680EnsemblPlants:AT3G60680.1
entrez:825239GeneID:825239GO:GO:0005777GO:GO:0005856
Gramene:AT3G60680.1hmmpanther:PTHR31161hmmpanther:PTHR31161:SF3HOGENOM:HOG000237632
InterPro:IPR006943KEGG:ath:AT3G60680ncoils:CoilOMA:HAPFVEE
Pfam:PF04859PhylomeDB:Q9LZZ5PIR:T47879Proteomes:UP000006548
RefSeq:NP_191627.1STRING:3702.AT3G60680.1TAIR:AT3G60680UniGene:At.34397
UniProt:Q9LZZ5
Coordinates (TAIR10) chr3:+:22430246..22431745
Molecular Weight (calculated) 56273.90 Da
IEP (calculated) 5.43
GRAVY (calculated) -0.30
Length 499 amino acids
Sequence (TAIR10)
(BLAST)
001: MREVETTAIT AAPPQFSQMF QKLAMAVKTK TYEFFTEDDN ERTDAEGFSL LDSSEDFITD QKVVVLKPDK PLLSASSPGS PIESPVNDVQ TKNLGVVSVV
101: KPNQKKLSQV RKLDTQMGLS LISSVFATAS SFEASYLQLQ AAHAPFVEEN VKAADRALVS NLQKLSDLKQ FYRNYRQSLD FESDLAIGSC LESRVQENQS
201: KLRALETVSN RLQAEMDAKD LQVWSLRNKL GEIQKSTSKL SKRLSSNSSL DVLLSVRVFE SLLYDAFKAT QKFTKILIEL MEKAGWDLDL VAKSVHPEVD
301: YAKERHNRYA LLSYVCLGMF RGFDGEGFDL NENDYEESER SSVDSSLREL MQHVSSNPME LLDRDKDCAF SRFCDKKYHE LIHPNMASSI FSNMDENEAV
401: LSSWRSLSTF YESFVTMASS IWTLHKLALS FDPAVEIFQV ESGVEFSIVF MENVLKRKQD KKFSMSPTRA KVGFTVVPGF KIGCTVIQCQ VYLTGGSKM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)