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AT3G45850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1); Has 65646 Blast hits to 44270 proteins in 2280 species: Archae - 809; Bacteria - 9619; Metazoa - 29444; Fungi - 5953; Plants - 4409; Viruses - 140; Other Eukaryotes - 15272 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5059eggNOG:KOG0243EMBL:AL162459EMBL:CP002686
EnsemblPlants:AT3G45850EnsemblPlants:AT3G45850.1EnsemblPlants:AT3G45850.2entrez:823728
Gene3D:3.40.850.10GeneID:823728GO:GO:0003777GO:GO:0005524
GO:GO:0005874GO:GO:0005886GO:GO:0007018Gramene:AT3G45850.1
Gramene:AT3G45850.2hmmpanther:PTHR24115hmmpanther:PTHR24115:SF515HOGENOM:HOG000116164
InterPro:IPR001752InterPro:IPR019821InterPro:IPR027417InterPro:IPR027640
KEGG:ath:AT3G45850KO:K10398ncoils:CoilOMA:RIHTPVV
PANTHER:PTHR24115Pfam:PF00225Pfscan:PS50067PhylomeDB:Q9LZU5
PIR:T47525PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067
Proteomes:UP000006548Reactome:R-ATH-983189RefSeq:NP_001190017.1RefSeq:NP_190171.1
scanprosite:PS00411SMART:SM00129SMR:Q9LZU5STRING:3702.AT3G45850.1
SUPFAM:SSF52540TAIR:AT3G45850UniGene:At.53777UniProt:Q9LZU5
Coordinates (TAIR10) chr3:-:16855814..16860950
Molecular Weight (calculated) 119015.00 Da
IEP (calculated) 5.89
GRAVY (calculated) -0.63
Length 1058 amino acids
Sequence (TAIR10)
(BLAST)
0001: MDSIQQRRGG IVSLSPAQTP RSSDKSARES RSSESNSTNR NDKEKGVNVQ VILRCRPLSE DEARIHTPVV ISCNENRREV AATQSIAGKH IDRHFAFDKV
0101: FGPASQQKDL YDQAICPIVF EVLEGYNCTI FAYGQTGTGK TYTMEGGARK KNGEFPSDAG VIPRAVKQIF DILEAQGAEY SMKVTFLELY NEEISDLLAP
0201: EETIKFVDEK SKKSIALMED GKGSVFVRGL EEEIVSTANE IYKILEKGSA KRRTAETLLN KQSSRSHSIF SITIHIKENT PEGEEMIKCG KLNLVDLAGS
0301: ENISRSGARE GRAREAGEIN KSLLTLGRVI NALVEHSGHI PYRDSKLTRL LRESLGGKTK TCVIATISPS IHCLEETLST LDYAHRAKNI KNKPEINQKM
0401: MKSAVMKDLY SEIDRLKQEV YAAREKNGIY IPKDRYIQEE AEKKAMAEKI ERLELQSESK DKRVVDLQEL YNSQQILTAE LSEKLEKTEK KLEETEHSLF
0501: DLEEKYRQAN ATIKEKEFVI SNLLKSEKSL VERAFQLRTE LESASSDVSN LFSKIERKDK IEDGNRFLIQ KFQSQLTQQL ELLHKTVASS VTQQEVQLKH
0601: MEEDMESFVS TKSEATEELR DRLSKLKRVY GSGIEALDNI AVKLDGNSQS TFSSLNSEVS KHSHELENVF KGFASEADML LQDLQSSLNK QEEKLITFAQ
0701: QQRKAHSRAV DTARSVSKVT VEFFKTLDTH ATKLTGIVEE AQTVNHKKLS EFENKFEECA ANEERQLLEK VAELLANSNA RKKNLVQMAV HDLRESASTR
0801: TTTLQHEMST MQDSTSSIKA EWSIHMEKTE SSHHEDTSAV ESGKKAMQEV LLNCLEKTEM SAHQWRKAQE SLVSLERNNV ASVDSIVRGG MDANENLRSQ
0901: FSTAVSSSLD VFDAANSSLL TSIDHSLQLD NDACTKVNSM IIPCCEDLIE LKSDHNHKII EITENAGKCL LDEYVVDEPS CSTPKKRPID IPSIESIEEL
1001: RTPASEELLR AFRDEKLSKQ ANGDAKQQQQ QQQQHLIRAS SLYEAAVSDS RYPLSAVN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)