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AT3G20630.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.941
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ubiquitin-specific protease 14
Curator
Summary (TAIR10)
Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency.
Computational
Description (TAIR10)
ubiquitin-specific protease 14 (UBP14); CONTAINS InterPro DOMAIN/s: Zinc finger, UBP-type (InterPro:IPR001607), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), UBA-like (InterPro:IPR009060), Ubiquitinyl hydrolase (InterPro:IPR016652); Has 2045 Blast hits to 1942 proteins in 227 species: Archae - 0; Bacteria - 2; Metazoa - 1042; Fungi - 463; Plants - 217; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G20630-MONOMERBioGrid:6942DNASU:821610EC:3.4.19.12eggNOG:COG5207eggNOG:KOG0944EMBL:AF302664
EMBL:AK226894EMBL:AP000410EMBL:AP002034EMBL:AY140096EMBL:CP002686EnsemblPlants:AT3G20630EnsemblPlants:AT3G20630.1
entrez:821610EvolutionaryTrace:Q8L6Y1Gene3D:3.30.40.10GeneID:821610Genevisible:Q8L6Y1GO:GO:0004843GO:GO:0005829
GO:GO:0006511GO:GO:0008242GO:GO:0008270GO:GO:0009793GO:GO:0016579GO:GO:0048767Gramene:AT3G20630.1
hmmpanther:PTHR24006hmmpanther:PTHR24006:SF22HOGENOM:HOG000162311InParanoid:Q8L6Y1InterPro:IPR001394InterPro:IPR001607InterPro:IPR009060
InterPro:IPR013083InterPro:IPR015940InterPro:IPR016652InterPro:IPR018200InterPro:IPR028889iPTMnet:Q8L6Y1KEGG:ath:AT3G20630
KO:K11836MEROPS:C19.084OMA:QVGHYVCPaxDb:Q8L6Y1PDB:1VEKPDB:1WIVPDBsum:1VEK
PDBsum:1WIVPfam:PF00443Pfam:PF00627Pfam:PF02148Pfam:Q8L6Y1Pfscan:PS50030Pfscan:PS50235
Pfscan:PS50271PhylomeDB:Q8L6Y1PIRSF:PIRSF016308PRIDE:Q8L6Y1PRO:PR:Q8L6Y1PROSITE:PS00972PROSITE:PS00973
PROSITE:PS50030PROSITE:PS50235PROSITE:PS50271ProteinModelPortal:Q8L6Y1Proteomes:UP000006548RefSeq:NP_566666.2scanprosite:PS00972
scanprosite:PS00973SMART:SM00165SMART:SM00290SMR:Q8L6Y1STRING:3702.AT3G20630.1SUPFAM:SSF46934SUPFAM:SSF54001
SUPFAM:SSF57850TAIR:AT3G20630tair10-symbols:ATUBP14tair10-symbols:PER1tair10-symbols:TTN6tair10-symbols:UBP14UniGene:At.16942
UniProt:Q8L6Y1
Coordinates (TAIR10) chr3:-:7203001..7208340
Molecular Weight (calculated) 88378.60 Da
IEP (calculated) 4.84
GRAVY (calculated) -0.35
Length 797 amino acids
Sequence (TAIR10)
(BLAST)
001: MELLRSNLSR VQIPEPTHRI YKHECCISFD TPRSEGGLFV DMNSFLAFGK DYVSWNYEKT GNPVYLHIKQ TRKSIPEDRP LKKPTLLAIG VDGGFDNNEP
101: EYEESYSIVI LPDFVSLPFP SVELPEKVRI AVDTVVNAVG AERKEQVAAW TAEKKLISEH ALTLQQIKSG IVIPPSGWKC SKCDKTENLW LNLTDGMILC
201: GRKNWDGTGG NNHAVEHYKE TAYPLAVKLG TITADLEAAD VYSYPEDDSV LDPLLAEHLA HFGIDFSSMQ KTEMTTAERE LDQNTNFDWN RIQESGKELV
301: PVFGPGYTGL VNLGNSCYLA ATMQIVFSTH SFISRYFSHQ SLKMAFEMAP ADPTLDLNMQ LTKLGHGLLS GKYSMPATQK DATTGDPRQE GIPPRMFKNV
401: IAASHAEFSS MRQQDALDFF LHLVGKVERA SNTTPDLDPS RSFKFGIEEK ILCPSGKVGY NKREDCILSL NIPLHEATNK DELEAFHKQK AGKGLEENDM
501: RSSDEIVRPR VPLEACLANF ASSEPIEDYY SSALKGMTTA IKTTGLTSFP DYLVLHMRKF VMEEGWVPKK LDVYIDVPDV IDISHMRSKG LQPGEELLPD
601: GVPEEVMESA QPVANEEIVA QLVSMGFSQL HCQKAAINTS NAGVEEAMNW LLSHMDDPDI DAPISHQTSD IDQSSVDTLL SFGFAEDVAR KALKASGGDI
701: EKATDWVFNN PNASVSDMDV SSSNSAQTPA QSGLPDGGGK YKLFGIVSHM GTSVHCGHYV AHILKEGRWV IFNDDKVGIS TDPPKDMGYV YFFQRLD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)