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AT3G03660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : WUSCHEL related homeobox 11
Curator
Summary (TAIR10)
Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.
Computational
Description (TAIR10)
WUSCHEL related homeobox 11 (WOX11); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 12 (TAIR:AT5G17810.2); Has 592 Blast hits to 582 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 52; Fungi - 5; Plants - 532; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Protein Annotations
EMBL:AC009327EMBL:AY251402EMBL:CP002686EnsemblPlants:AT3G03660
EnsemblPlants:AT3G03660.1entrez:821196ExpressionAtlas:Q6X7J3Gene3D:1.10.10.60
GeneID:821196Genevisible:Q6X7J3GO:GO:0003677GO:GO:0005634
GO:GO:0006351GO:GO:0006355GO:GO:0007275hmmpanther:PTHR24326
hmmpanther:PTHR24326:SF280HOGENOM:HOG000064623InParanoid:Q6X7J3InterPro:IPR001356
InterPro:IPR009057Pfam:PF00046Pfam:Q6X7J3Pfscan:PS50071
PRO:PR:Q6X7J3PROSITE:PS50071ProteinModelPortal:Q6X7J3Proteomes:UP000006548
RefSeq:NP_187016.2SMART:SM00389SUPFAM:SSF46689TAIR:AT3G03660
tair10-symbols:WOX11UniGene:At.40942UniProt:Q6X7J3
Coordinates (TAIR10) chr3:-:889515..892162
Molecular Weight (calculated) 29421.10 Da
IEP (calculated) 7.00
GRAVY (calculated) -0.59
Length 268 amino acids
Sequence (TAIR10)
(BLAST)
001: MDQEQTPHSP TRHSRSPPSS ASGSTSAEPV RSRWSPKPEQ ILILESIFHS GMVNPPKEET VRIRKMLEKF GAVGDANVFY WFQNRRSRSR RRQRQLQAAA
101: AAADATTNTC DQTMMVSNSL PHHSGSDLGF GGCSTSSNYL FASSSSSYGG GCDNQSNSGM ENLLTMSGQM SYHEATHHHY QNHSSNVTSI LCPSDQNSNF
201: QYQQGAITVF INGVPTEVTR GGIDMKATFG EDLVLVHSSG VPLPTDEFGF LMHSLQHGEA YFLVPRQT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)