AT3G02220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.975 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:412210..413536 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 25616.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 7.38 | ||||||||||||||||||||||||
| GRAVY (calculated) | -1.15 | ||||||||||||||||||||||||
| Length | 227 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSRQGPPKH QNKFAWVPKA GVKINETEVG GRFRPLSEIT GVCYRCREQI AWKRKYGKYK TLTEATKCQK CTKRNVRQAY HKLCPGCAKE QKVCAKCCQS 101: VDQILGRDIY EVEAEQKLLD ETIKNARERD RRTLLRAMNK DNKPNKSDEE ASRSDSSKVG DVFPSTSLEE YANKSGRVSG IIGHGSVPDH AHDDASGPES 201: DEDDNVGDDE HDLREDSDEN EQSQLQK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)