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AT3G02220.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111SCCeggNOG:KOG3241EMBL:AC009755EMBL:CP002686EnsemblPlants:AT3G02220EnsemblPlants:AT3G02220.1entrez:821238
GeneID:821238Gramene:AT3G02220.1hmmpanther:PTHR22876hmmpanther:PTHR22876:SF5InterPro:IPR019351KEGG:ath:AT3G02220ncoils:Coil
OMA:CCTSVKQPfam:PF10217PhylomeDB:Q9SRT8Proteomes:UP000006548RefSeq:NP_186871.1STRING:3702.AT3G02220.1TAIR:AT3G02220
UniGene:At.46724UniProt:Q9SRT8
Coordinates (TAIR10) chr3:-:412210..413536
Molecular Weight (calculated) 25616.70 Da
IEP (calculated) 7.38
GRAVY (calculated) -1.15
Length 227 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSRQGPPKH QNKFAWVPKA GVKINETEVG GRFRPLSEIT GVCYRCREQI AWKRKYGKYK TLTEATKCQK CTKRNVRQAY HKLCPGCAKE QKVCAKCCQS
101: VDQILGRDIY EVEAEQKLLD ETIKNARERD RRTLLRAMNK DNKPNKSDEE ASRSDSSKVG DVFPSTSLEE YANKSGRVSG IIGHGSVPDH AHDDASGPES
201: DEDDNVGDDE HDLREDSDEN EQSQLQK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)