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AT2G46490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.697
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J6WIeggNOG:ENOG410ZCS3EMBL:AC006418EMBL:AC006526
EMBL:AY070101EMBL:AY117163EMBL:CP002685EnsemblPlants:AT2G46490
EnsemblPlants:AT2G46490.1entrez:819258GeneID:819258Gramene:AT2G46490.1
hmmpanther:PTHR35121hmmpanther:PTHR35121:SF2HOGENOM:HOG000154033KEGG:ath:AT2G46490
OMA:WTIDEGEPhylomeDB:Q9ZPZ0PIR:E84903Proteomes:UP000006548
RefSeq:NP_182172.1STRING:3702.AT2G46490.1TAIR:AT2G46490UniGene:At.25021
UniProt:Q9ZPZ0
Coordinates (TAIR10) chr2:+:19079457..19079861
Molecular Weight (calculated) 14570.70 Da
IEP (calculated) 6.76
GRAVY (calculated) -0.74
Length 134 amino acids
Sequence (TAIR10)
(BLAST)
001: MAADGIFRSI FEGCISGLDS AIERRPYHKN CGCALHDKSS GAGKNQNQRR PPSCRRHGSS ESISFPIRRS WSEGNIMAMN LFSSSSSSSN LQSLSSSSSL
101: SNLASDLPVD NAATEEPSRS NKQLRWTIDE GEDD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)