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AT2G32410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
peroxisome 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AXR1-like
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AXR1-like (AXL); FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: auxin homeostasis, auxin mediated signaling pathway, post-embryonic development, protein ubiquitination; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT1G05180.1); Has 6613 Blast hits to 5967 proteins in 1376 species: Archae - 160; Bacteria - 2652; Metazoa - 1238; Fungi - 918; Plants - 479; Viruses - 0; Other Eukaryotes - 1166 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0476eggNOG:KOG2016EMBL:AC005700EMBL:CP002685EnsemblPlants:AT2G32410EnsemblPlants:AT2G32410.1entrez:817802
ExpressionAtlas:Q9ZV69Gene3D:3.40.50.720GeneID:817802GO:GO:0005634GO:GO:0005777GO:GO:0005829GO:GO:0009791
GO:GO:0010252GO:GO:0019781GO:GO:0045116Gramene:AT2G32410.1hmmpanther:PTHR10953HOGENOM:HOG000216537InterPro:IPR000594
InterPro:IPR016040InterPro:IPR030667OMA:PDMKASTPfam:PF00899PhylomeDB:Q9ZV69PIR:G84732PIRSF:PIRSF039099
Proteomes:UP000006548RefSeq:NP_180800.1SMR:Q9ZV69STRING:3702.AT2G32410.1SUPFAM:SSF69572TAIR:AT2G32410tair10-symbols:AXL
UniGene:At.38079UniPathway:UPA00885UniProt:Q9ZV69
Coordinates (TAIR10) chr2:+:13757702..13760862
Molecular Weight (calculated) 57944.00 Da
IEP (calculated) 4.99
GRAVY (calculated) -0.21
Length 523 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEPKTKYDR QLRIWGELGQ SALETASICL LNCGPTGSEA LKNLVIGGIG SITIVDGSKV EIGDLGNNFM VDAKSVGQSR AKTVCGFLQE LNDSVKANFV
101: EENPDTLIST DPSFFSQFTL VIATQLVEDS MVKLDRICRE ANVMLVLARS YGLTGFVRIS VKEHTAIETK PDHSLDDLRL NSPWPELKSY VESIDLNVEE
201: PAAHKHIPYV VILVKVAEEW AQHHSGNLPS TREEKNEFKD LVKSKMVSAD EENYKEALLA AFKVFAPTGI SQEIQDINHD SCAEVGSNSS DFWVMVAALK
301: EFISNEGGGE VPLEGSMPDM ISSTEHYINL QKIYHSKAEA DFLSMEQRVK SILVKVGQDP SSISKPTIKS FCKNARKLKV CRYRTIEDEF KSPSTTELHK
401: YLADENYSGA IGFYILLRAV DRFAGTYKKF PGQFDGSTDE DASQLKTIAL SLLSEMGCDG YELQEELYNE MCRFGAAEIH VVAALIGGIT SQEVIKLITK
501: QFVPKRGTFI FNGIDHKSQS LTL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)