AT1G72280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 ASURE: endoplasmic reticulum What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : endoplasmic reticulum oxidoreductins 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
endoplasmic reticulum oxidoreductin | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
endoplasmic reticulum oxidoreductins 1 (ERO1); FUNCTIONS IN: FAD binding, oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor; INVOLVED IN: oxidation reduction, protein thiol-disulfide exchange; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Endoplasmic reticulum oxidoreductin 1 (InterPro:IPR007266); BEST Arabidopsis thaliana protein match is: endoplasmic reticulum oxidoreductins 2 (TAIR:AT2G38960.1); Has 485 Blast hits to 477 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 149; Plants - 72; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27212039..27214506 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53833.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 469 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKGAIKEEE SEKKRKTWRW PLATLVVVFL AVAVSSRTNS NVGFFFSDRN SCSCSLQKTG KYKGMIEDCC CDYETVDNLN TEVLNPLLQD LVTTPFFRYY 101: KVKLWCDCPF WPDDGMCRLR DCSVCECPEN EFPEPFKKPF VPGLPSDDLK CQEGKPQGAV DRTIDNRAFR GWVETKNPWT HDDDTDSGEM SYVNLQLNPE 201: RYTGYTGPSA RRIWDSIYSE NCPKYSSGET CPEKKVLYKL ISGLHSSISM HIAADYLLDE SRNQWGQNIE LMYDRILRHP DRVRNMYFTY LFVLRAVTKA 301: TAYLEQAEYD TGNHAEDLKT QSLIKQLLYS PKLQTACPVP FDEAKLWQGQ SGPELKQQIQ KQFRNISALM DCVGCEKCRL WGKLQVQGLG TALKILFSVG 401: NQDIGDQTLQ LQRNEVIALV NLLNRLSESV KMVHDMSPDV ERLMEDQIAK VSAKPARLRR IWDLAVSFW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)