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AT3G24090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases; FUNCTIONS IN: sugar binding, transaminase activity, glutamine-fructose-6-phosphate transaminase (isomerizing) activity; INVOLVED IN: carbohydrate biosynthetic process, carbohydrate metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Sugar isomerase (SIS) (InterPro:IPR001347), Glucosamine-fructose-6-phosphate aminotransferase, isomerising (InterPro:IPR005855), Glutamine amidotransferase, type II (InterPro:IPR017932); Has 19000 Blast hits to 18984 proteins in 2800 species: Archae - 500; Bacteria - 10467; Metazoa - 411; Fungi - 223; Plants - 106; Viruses - 14; Other Eukaryotes - 7279 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0449eggNOG:KOG1268EMBL:AP001297EMBL:CP002686
EnsemblPlants:AT3G24090EnsemblPlants:AT3G24090.1entrez:821995Gene3D:3.60.20.10
GeneID:821995GO:GO:0004360GO:GO:0005975GO:GO:0030246
GO:GO:1901137Gramene:AT3G24090.1gramene_pathway:2.6.1.16gramene_pathway:UDPNACETYLGALSYN-PWY
gramene_plant_reactome:1119386gramene_plant_reactome:6875897hmmpanther:PTHR10937hmmpanther:PTHR10937:SF0
HOGENOM:HOG000258898InterPro:IPR001347InterPro:IPR005855InterPro:IPR017932
InterPro:IPR029055KEGG:00250+2.6.1.16KEGG:00520+2.6.1.16KEGG:ath:AT3G24090
KO:K00820OMA:GEFFCASPANTHER:PTHR10937:SF0Pfam:PF01380
Pfam:PF13522Pfscan:PS51278Pfscan:PS51464PhylomeDB:Q9LIP9
PROSITE:PS51278PROSITE:PS51464Proteomes:UP000006548Reactome:R-ATH-446210
RefSeq:NP_189051.3SMR:Q9LIP9STRING:3702.AT3G24090.1SUPFAM:SSF53697
SUPFAM:SSF56235TAIR:AT3G24090TIGRfam:TIGR01135TIGRFAMs:TIGR01135
UniGene:At.70745UniProt:Q9LIP9
Coordinates (TAIR10) chr3:-:8697838..8700971
Molecular Weight (calculated) 74609.40 Da
IEP (calculated) 6.38
GRAVY (calculated) -0.15
Length 677 amino acids
Sequence (TAIR10)
(BLAST)
001: MCGIFAYLNF HANKERRYIL DVLFNGLRRL EYRGYDSAGI AIDNSSPSSS PLVFRQAGNI ESLVNSVNEE ITNTDLNLDE VFYFHAGIAH TRWATHGEPA
101: PRNSHPQSSG PGDDFLVVHN GVITNYEVLK ETLVRHGFTF ESDTDTEVIP KLAKFVFDKA NEEGGQTVTF CEVVFEVMRH LEGAYALIFK SWHYPNELIA
201: CKLGSPLLLG VKELDQGESN SHVFQDAHFL SKNDHPKEFF LSSDPHALVE HTKKVLVIED GEVVNLKDGG VSILKFENER GRCNGLSRPA SVERALSVLE
301: MEVEQISKGK YDHYMQKEIH EQPESLTTTM RGRLIRGGSR KTKTVLLGGL KDHLKTIRRS RRIVFIGCGT SYNAALASRP ILEELSGIPV SMEIASDLWD
401: RQGPIYREDT AVFVSQSGET ADTLLALDYA RENGALCVGI TNTVGSSIAR KTHCGVHINA GAEIGVASTK AYTSQIVVMV MLALAIGSDT ISSQKRREAI
501: IDGLLDLPYK VKEVLKLDDE MKDLAQLLID EQSLLVFGRG YNYATALEGA LKVKEVALMH SEGILAGEMK HGPLALVDEN LPIAVIATRD ACFSKQQSVI
601: QQLHARKGRL IVMCSKGDAA SVSSSGSCRA IEVPQVEDCL QPVINIVPLQ LLAYHLTVLR GHNVDQPRNL AKSVTTQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)