AT1G63670.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein of unknown function (DUF3741) | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related (TAIR:AT2G45900.1); Has 703 Blast hits to 632 proteins in 148 species: Archae - 5; Bacteria - 69; Metazoa - 168; Fungi - 50; Plants - 149; Viruses - 4; Other Eukaryotes - 258 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:23607527..23610003 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 79484.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.91 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.78 | ||||||||||||||||||||||||||||||||||||
| Length | 689 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKKRSPRSS KSPGPAIFPK SPLVYESYKS GCGWKLIKFF DFGHVKSGNK RLGSEKKKFV RDSAGNVYTK SQLDLLKKLH EKCQCNDRIV EEERSCKPKT 101: RRRSLSSDRE LEKYESKPVQ GLLEREIRRI KNLKDETCDV PDKQKQSSLS EIENDSDKQM DMKNGRDCKK SSEINLQACV NEAAETFICS KAEEKGKDRS 201: KQFMEALDIL SSNKELFITL LQDPHSFSAK KSLDLEGSKV KEPRDKSPSM ADDLDSIVLL KPRLSSSVDD KVYLRFKHLA KKLKLVVGSN KDSNHAENKP 301: EGSSRGREIE AAAFRTSDVS TSTVGHRSPE SPVFRRKKRV ESDVFKLSIE NDVLPRRFMV ERQQERLNSS PVYEVPYALS SLQTKLKERR QKLEKKRESF 401: KLWSLDKNFE VFDPNPYNSN LRFLENNCTG SSEYKSLRTH VEDGFVEDRY LESSLAETNL SLERQDCNIH DPKQEQEQPS PVSVLERIHL EDETVIPGNV 501: KISNLEEKIG LSFDDPNIDL IEKESVHEFV KKVLEASRLN WTNLMARCNE DTSLLDEFSH GSHNDQLLLV LDYTDEILRE IYRQDIKFWP FSPSKSSRVL 601: NLESSLREDD LIHETMRHFD WSLLCSDSPT RSLDQIIETD LIKPCLWLDF GGESEGVVSD IVEKIQQQLV LEISHELRTM QRSILCRLI |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)