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AT1G30570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : hercules receptor kinase 2
Curator
Summary (TAIR10)
Encodes HERCULES2 (HERK2), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.
Computational
Description (TAIR10)
hercules receptor kinase 2 (HERK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus, unidimensional cell growth; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: protein kinase family protein (TAIR:AT5G54380.1); Has 114546 Blast hits to 113143 proteins in 4406 species: Archae - 97; Bacteria - 12871; Metazoa - 42415; Fungi - 9727; Plants - 32943; Viruses - 349; Other Eukaryotes - 16144 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G30570-MONOMEREC:2.7.11.-eggNOG:COG0515eggNOG:KOG1187
EMBL:AC007060EMBL:CP002684EnsemblPlants:AT1G30570EnsemblPlants:AT1G30570.1
entrez:839937Gene3D:2.60.120.200GeneID:839937Genevisible:Q9SA72
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0009741
GO:GO:0009826GO:GO:0016021Gramene:AT1G30570.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF41HOGENOM:HOG000238317InParanoid:Q9SA72InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788iPTMnet:Q9SA72KEGG:ath:AT1G30570
OMA:CFYLRRKPaxDb:Q9SA72Pfam:PF07714Pfam:PF12819
Pfam:Q9SA72Pfscan:PS50011PhylomeDB:Q9SA72PIR:H86430
PRIDE:Q9SA72PRO:PR:Q9SA72PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9SA72Proteomes:UP000006548RefSeq:NP_174345.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9SA72
STRING:3702.AT1G30570.1SUPFAM:SSF56112SwissPalm:Q9SA72TAIR:AT1G30570
tair10-symbols:HERK2TMHMM:TMhelixUniGene:At.51840UniProt:Q9SA72
Coordinates (TAIR10) chr1:+:10828933..10831482
Molecular Weight (calculated) 93951.90 Da
IEP (calculated) 6.59
GRAVY (calculated) -0.16
Length 849 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKLRKKYLE HLLCVLIFFT YVIGYGEAQS KSFLVDCGSN ATTEVDGRTW VGDLSPNKSV TLQGFDAITA STSKGSSVYA EIYKTARVFD AVLNYTFEGI
101: TQGNYFVRLH FSPFAIENHN VNESSFSVFA DGLRLMLDIN IAGEIAHKNL ILESTGHNAT ASSLVKEFLL PTGPGKLVLS FIPEKGSFGF VNAIEIVSVD
201: DKLFKESVTK VGGSEVELGL GGRGIETMYR LNVGGPKLGP SKDLKLYRTW ETDLSYMVIE NAGVEVKNSS NITYALADDS PVAPLLVYET ARMMSNTEVL
301: EKRFNISWKF EVDPNFDYLV RLHFCELLVD KQNQRIFRIY INNQTAAGNF DIFAHAGGKN KGIYQDYLDP VSSKNDVLWI QLGPDSSVGA SGDALLSGLE
401: IFKLSKNGNL AHLIRFDSTG HSVSDSKMRI IWISVGAGIA IIIFFVFLGI LVVCLCKKRR SKSDESKNNP PGWRPLFLHV NNSTANAKAT GGSLRLNTLA
501: ASTMGRKFTL AEIRAATKNF DDGLAIGVGG FGKVYRGELE DGTLIAIKRA TPHSQQGLAE FETEIVMLSR LRHRHLVSLI GFCDEHNEMI LVYEYMANGT
601: LRSHLFGSNL PPLSWKQRLE ACIGSARGLH YLHTGSERGI IHRDVKTTNI LLDENFVAKM SDFGLSKAGP SMDHTHVSTA VKGSFGYLDP EYFRRQQLTE
701: KSDVYSFGVV LFEAVCARAV INPTLPKDQI NLAEWALSWQ KQRNLESIID SNLRGNYSPE SLEKYGEIAE KCLADEGKNR PMMGEVLWSL EYVLQIHEAW
801: LRKQNGENSF SSSQAVEEAP ESFTLPACSN QDSSETEQSQ TGSALHNSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)