AT3G06150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.673 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19060.1); Has 61 Blast hits to 59 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1861971..1863755 | ||||||||||||||||||||
| Molecular Weight (calculated) | 67577.90 Da | ||||||||||||||||||||
| IEP (calculated) | 9.10 | ||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||
| Length | 594 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPEKGMIFPP VPSQLVILRP SPLLQWRLGA LTALVCFLML VVWSIDGCSI QSFVQPWRFN AYSVRISPSP SPFMSTKPNL VSEKPHRQNL TLMMAPRNLV 101: PKKTNLTSNS TRVQFEWITA GSQKNFTANL MRGWLAPGGA PCREAKTVEI SVPGVDGIDS VELTAGEIHE FKFQAIDESG KNVCIGGDYF ETDISGENWK 201: SRPPVKDFGN GTYSFSLQVH PEFAGDFNLT VILLFRHYQG LKFSTSRLGF DRKLRNVRLR FVKTPDVTLP ELRSCKKSDF NRDAWSGRWT RLGKNDECQI 301: SNDGRYRCLA ADFPCRKPWC DGAVGAIESN GWVYSSHCSF KLFSAEKAWD CLKGKWIFFW GDSNHVDSIR NLLNFVLGHP EIPAVPRRFD MKFSNPKNPS 401: ETVRITSIFN GHWNETKNYQ GLDSLKDRDF RELLKKYFNE ETNRVPDVMI VNSGLHDGIH WTSLRAFAKG AETAAAFWRE VFDGVKSRGL QPPEVIFRNT 501: IATGGYARML AFNPSKMEAF NGVFLEKMRD AGLVTSVVDN FDMTYPWHYD NRCNDGVHYG RAPAKMRWRD GEIGHQYFVD LMLVHVLLNA LCVR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)