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AT5G66080.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23832523 (2014): plasma membrane
  • PMID:23832523 (2014): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G51370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G66080-MONOMERBioGrid:21982EC:3.1.3.16eggNOG:COG0631
eggNOG:KOG0700EMBL:AB011474EMBL:AY062587EMBL:BT001229
EMBL:CP002688EnsemblPlants:AT5G66080EnsemblPlants:AT5G66080.1entrez:836740
Gene3D:3.60.40.10GeneID:836740Genevisible:Q9FKX4GO:GO:0004722
GO:GO:0046872Gramene:AT5G66080.1hmmpanther:PTHR13832hmmpanther:PTHR13832:SF237
HOGENOM:HOG000238703InParanoid:Q9FKX4IntAct:Q9FKX4InterPro:IPR000222
InterPro:IPR001932InterPro:IPR015655iPTMnet:Q9FKX4KEGG:ath:AT5G66080
MINT:MINT-8390450OMA:DSNAMSKPANTHER:PTHR13832PaxDb:Q9FKX4
Pfam:PF00481Pfam:Q9FKX4Pfscan:PS51746PhylomeDB:Q9FKX4
PRIDE:Q9FKX4PRO:PR:Q9FKX4PROSITE:PS01032PROSITE:PS51746
ProteinModelPortal:Q9FKX4Proteomes:UP000006548RefSeq:NP_201409.1scanprosite:PS01032
SMART:SM00332SMR:Q9FKX4STRING:3702.AT5G66080.1SUPFAM:SSF81606
TAIR:AT5G66080UniGene:At.27294UniProt:Q9FKX4
Coordinates (TAIR10) chr5:-:26423577..26425031
Molecular Weight (calculated) 42965.30 Da
IEP (calculated) 8.07
GRAVY (calculated) -0.25
Length 385 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSLFFNFLT SCLWPSSSTT SHTYSDSKGK QDGLLWYKDS AHHLFGDFSM AVVQANNLLE DQSQVESGPL TTLSSSGPYG TFVGVYDGHG GPETSRFVND
101: HLFHHLKRFA AEQDSMSVDV IRKAYEATEE GFLGVVAKQW AVKPHIAAVG SCCLIGVVCD GKLYVANVGD SRAVLGKVIK ATGEVNALQL SAEHNVSIES
201: VRQEMHSLHP DDSHIVVLKH NVWRVKGIIQ VSRSIGDVYL KKSEFNKEPL YTKYRLREPM KRPILSWEPS ITVHDLQPDD QFLIFASDGL WEQLSNQEAV
301: EIVQNHPRNG IARRLVKAAL QEAAKKREMR YSDLNKIERG VRRHFHDDIT VVVLFLDTNL LSRASSLKTP SVSIRGGGIT LPKKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)