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AT5G64700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.934
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G43650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ISR1eggNOG:ENOG410Y944EMBL:AB025637EMBL:CP002688
EnsemblPlants:AT5G64700EnsemblPlants:AT5G64700.1entrez:836591GeneID:836591
Genevisible:Q9FGG3GO:GO:0005886GO:GO:0006810GO:GO:0016021
GO:GO:0022857GO:GO:0055085Gramene:AT5G64700.1hmmpanther:PTHR31218
hmmpanther:PTHR31218:SF15HOGENOM:HOG000237441InParanoid:Q9FGG3InterPro:IPR000620
InterPro:IPR030184KEGG:ath:AT5G64700OMA:AWCIEKRPANTHER:PTHR31218
PaxDb:Q9FGG3Pfam:PF00892Pfam:Q9FGG3PhylomeDB:Q9FGG3
PRIDE:Q9FGG3PRO:PR:Q9FGG3ProteinModelPortal:Q9FGG3Proteomes:UP000006548
RefSeq:NP_201275.1SUPFAM:0043518TAIR:AT5G64700TMHMM:TMhelix
UniGene:At.50556UniProt:Q9FGG3
Coordinates (TAIR10) chr5:-:25865190..25866845
Molecular Weight (calculated) 39754.90 Da
IEP (calculated) 9.43
GRAVY (calculated) 0.74
Length 359 amino acids
Sequence (TAIR10)
(BLAST)
001: MDMESKKPYL MVTIIQVIYT IMFLISKAVF NGGMNTFVFV FYRQAFATIF LAPLAFFFER KSAPPLSFVT FIKIFMLSLF GVTLSLDLNG IALSYTSATL
101: AAATTASLPA ITFFLALLFG MERLKVKSIQ GTAKLVGITV CMGGVIILAI YKGPLLKLPL CPHFYHGQEH PHRNNPGHVS GGSTSWLKGC VLMITSNILW
201: GLWLVLQGRV LKVYPSKLYF TTLHCLLSSI QSFVIAIALE RDISAWKLGW NLRLVAVIYC GFIVTGVAYY LQSWVIEKRG PVFLSMFTPL SLLFTLLSSA
301: ILLCEIISLG SIVGGLLLII GLYCVLWGKS REEKNSGDDK IDLQKENDVV CNEVKVVIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)