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AT5G63020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.983
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (CC-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT1G12220.2); Has 14258 Blast hits to 13662 proteins in 567 species: Archae - 8; Bacteria - 542; Metazoa - 1192; Fungi - 130; Plants - 12234; Viruses - 0; Other Eukaryotes - 152 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:KOG4658EMBL:AB009051EMBL:AY080696
EMBL:CP002688EMBL:U97223EnsemblPlants:AT5G63020EnsemblPlants:AT5G63020.1
entrez:836422Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:836422
Genevisible:Q8RXS5GO:GO:0005524GO:GO:0006952GO:GO:0043531
Gramene:AT5G63020.1hmmpanther:PTHR23155hmmpanther:PTHR23155:SF639HOGENOM:HOG000238348
InParanoid:Q8RXS5InterPro:IPR001611InterPro:IPR002182InterPro:IPR027417
InterPro:IPR032675iPTMnet:Q8RXS5KEGG:ath:AT5G63020ncoils:Coil
OMA:LVERSICPaxDb:Q8RXS5Pfam:PF00931Pfam:PF13855
Pfam:Q8RXS5PhylomeDB:Q8RXS5PRIDE:Q8RXS5PRO:PR:Q8RXS5
ProteinModelPortal:Q8RXS5Proteomes:UP000006548RefSeq:NP_201107.2SMR:Q8RXS5
STRING:3702.AT5G63020.1SUPFAM:SSF52058SUPFAM:SSF52540TAIR:AT5G63020
UniGene:At.49209UniGene:At.68259UniProt:Q8RXS5
Coordinates (TAIR10) chr5:-:25283252..25286002
Molecular Weight (calculated) 101807.00 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.13
Length 888 amino acids
Sequence (TAIR10)
(BLAST)
001: MGGCVSVSIS CDQLTKNVCS CLNRNGDYIH GLEENLTALQ RALEQIEQRR EDLLRKILSE ERRGLQRLSV VQGWVSKVEA IVPRVNELVR MRSVQVQRLC
101: LCGFCSKNLV SSYRYGKRVM KMIEEVEVLR YQGDFAVVAE RVDAARVEER PTRPMVAMDP MLESAWNRLM EDEIGILGLH GMGGVGKTTL LSHINNRFSR
201: VGGEFDIVIW IVVSKELQIQ RIQDEIWEKL RSDNEKWKQK TEDIKASNIY NVLKHKRFVL LLDDIWSKVD LTEVGVPFPS RENGCKIVFT TRLKEICGRM
301: GVDSDMEVRC LAPDDAWDLF TKKVGEITLG SHPEIPTVAR TVAKKCRGLP LALNVIGETM AYKRTVQEWR SAIDVLTSSA AEFSGMEDEI LPILKYSYDN
401: LKSEQLKLCF QYCALFPEDH NIEKNDLVDY WIGEGFIDRN KGKAENQGYE IIGILVRSCL LMEENQETVK MHDVVREMAL WIASDFGKQK ENFIVQAGLQ
501: SRNIPEIEKW KVARRVSLMF NNIESIRDAP ESPQLITLLL RKNFLGHISS SFFRLMPMLV VLDLSMNRDL RHLPNEISEC VSLQYLSLSR TRIRIWPAGL
601: VELRKLLYLN LEYTRMVESI CGISGLTSLK VLRLFVSGFP EDPCVLNELQ LLENLQTLTI TLGLASILEQ FLSNQRLASC TRALRIENLN PQSSVISFVA
701: TMDSLQELHF ADSDIWEIKV KRNETVLPLH IPTTTTFFPN LSQVSLEFCT RLRDLTWLIF APNLTVLRVI SASDLKEVIN KEKAEQQNLI PFQELKELRL
801: ENVQMLKHIH RGPLPFPCLQ KILVNGCSEL RKLPLNFTSV PRGDLVIEAH KKWIEILEWE DEATKARFLP TLKAFPENID ADGYEISF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)