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AT5G55260.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein phosphatase X 2
Curator
Summary (TAIR10)
Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase.
Computational
Description (TAIR10)
protein phosphatase X 2 (PPX2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase X 1 (TAIR:AT4G26720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G55260-MONOMEREC:3.1.3.16eggNOG:COG0639eggNOG:KOG0372
EMBL:AB010071EMBL:AF030290EMBL:BT024716EMBL:CP002688
EMBL:Z22596EnsemblPlants:AT5G55260EnsemblPlants:AT5G55260.1entrez:835619
Gene3D:3.60.21.10GeneID:835619Genevisible:P48528GO:GO:0004722
GO:GO:0006470GO:GO:0009532GO:GO:0046872Gramene:AT5G55260.1
hmmpanther:PTHR11668hmmpanther:PTHR11668:SF278HOGENOM:HOG000172696InParanoid:P48528
InterPro:IPR004843InterPro:IPR006186InterPro:IPR029052KEGG:ath:AT5G55260
KO:K15423OMA:QFNYKNDPaxDb:P48528Pfam:P48528
Pfam:PF00149PhylomeDB:P48528PIR:S42559PRIDE:P48528
PRINTS:PR00114PRO:PR:P48528PROSITE:PS00125ProteinModelPortal:P48528
Proteomes:UP000006548RefSeq:NP_200337.1scanprosite:PS00125SMART:SM00156
SMR:P48528STRING:3702.AT5G55260.1SUPFAM:SSF56300TAIR:AT5G55260
tair10-symbols:PPX-2tair10-symbols:PPX2UniGene:At.105UniProt:P48528
Coordinates (TAIR10) chr5:+:22416808..22418621
Molecular Weight (calculated) 34727.60 Da
IEP (calculated) 4.96
GRAVY (calculated) -0.14
Length 305 amino acids
Sequence (TAIR10)
(BLAST)
001: MSDLDKQIEQ LKRCEALKES EVKALCLKAM EILVEESNVQ RVDAPVTICG DIHGQFYDMK ELFKVGGDCP KTNYLFLGDF VDRGFYSVET FLLLLALKVR
101: YPDRITLIRG NHESRQITQV YGFYDECLRK YGSVNVWRYC TDIFDYLSLS ALVENKIFCV HGGLSPAIMT LDQIRAIDRK QEVPHDGAMC DLLWSDPEDI
201: VDGWGLSPRG AGFLFGGSVV TSFNHSNNID YICRAHQLVM EGYKWMFNSQ IVTVWSAPNY CYRCGNVAAI LELDENLNKE FRVFDAAPQE SRGALAKKPA
301: PDYFL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)