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AT5G55070.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Dihydrolipoamide succinyltransferase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Dihydrolipoamide succinyltransferase; FUNCTIONS IN: zinc ion binding, acyltransferase activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: cytosolic ribosome, mitochondrion; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: 2-oxo acid dehydrogenase, lipoyl-binding site (InterPro:IPR003016), Dihydrolipoamide succinyltransferase (InterPro:IPR006255), 2-oxoacid dehydrogenase acyltransferase, catalytic domain (InterPro:IPR001078), Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089); BEST Arabidopsis thaliana protein match is: Dihydrolipoamide succinyltransferase (TAIR:AT4G26910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G55070-MONOMERBioGrid:20842EC:2.3.1.61eggNOG:COG0508
eggNOG:KOG0559EMBL:AB010071EMBL:AJ223803EMBL:AY042897
EMBL:AY128726EMBL:CP002688EnsemblPlants:AT5G55070EnsemblPlants:AT5G55070.1
entrez:835598Gene3D:3.30.559.10GeneID:835598Genevisible:Q9FLQ4
GO:GO:0004149GO:GO:0005739GO:GO:0006099GO:GO:0006979
GO:GO:0008270GO:GO:0022626GO:GO:0033512GO:GO:0045252
Gramene:AT5G55070.1gramene_pathway:2.3.1.61gramene_pathway:PWY-5084hmmpanther:PTHR23151
hmmpanther:PTHR23151:SF8HOGENOM:HOG000281563InParanoid:Q9FLQ4IntAct:Q9FLQ4
InterPro:IPR000089InterPro:IPR001078InterPro:IPR003016InterPro:IPR006255
InterPro:IPR011053InterPro:IPR023213KEGG:00020+2.3.1.61KEGG:00310+2.3.1.61
KEGG:ath:AT5G55070KO:K00658OMA:EMITYDYPaxDb:Q9FLQ4
Pfam:PF00198Pfam:PF00364Pfam:Q9FLQ4Pfscan:PS50968
PhylomeDB:Q9FLQ4PRIDE:Q9FLQ4PRO:PR:Q9FLQ4PROSITE:PS00189
PROSITE:PS50968ProteinModelPortal:Q9FLQ4Proteomes:UP000006548Reactome:R-ATH-71064
Reactome:R-ATH-71403RefSeq:NP_200318.1scanprosite:PS00189SMR:Q9FLQ4
STRING:3702.AT5G55070.1SUPFAM:SSF51230SUPFAM:SSF52777TAIR:AT5G55070
TIGRfam:TIGR01347TIGRFAMs:TIGR01347UniGene:At.20476UniGene:At.71917
UniPathway:UPA00868UniProt:Q9FLQ4
Coordinates (TAIR10) chr5:+:22347637..22350409
Molecular Weight (calculated) 50136.40 Da
IEP (calculated) 9.67
GRAVY (calculated) -0.25
Length 464 amino acids
Sequence (TAIR10)
(BLAST)
001: MMLRAVFRRA SIRGSSSASG LGKSLQSSRV AVSAQFHSVS ATETLVPRGN HAHSFHHRSC PGCPDCSRTI INGYQGTALQ RWVRPFSSDS GDVVEAVVPH
101: MGESITDGTL AAFLKKPGDR VEADEAIAQI ETDKVTIDIA SPASGVIQEF LVKEGDTVEP GNKVARISTS ADAVSHVAPS EKAPEKPAPK PSPPAEKPKV
201: ESTKVAEKPK APSPPPPPPS KQSAKEPQLP PKDRERRVPM TRLRKRVATR LKDSQNTFAL LTTFNEVDMT NLMKLRSQYK DAFLEKHGVK LGLMSGFIKA
301: AVSALQHQPV VNAVIDGDDI IYRDYVDISI AVGTSKGLVV PVIRDADKMN FADIEKTING LAKKATEGTI SIDEMAGGSF TVSNGGVYGS LISTPIINPP
401: QSAILGMHSI VQRPMVVGGS VVPRPMMYVA LTYDHRLIDG REAVYFLRRI KDVVEDPQRL LLDI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)