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AT5G54140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.601
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : IAA-leucine-resistant (ILR1)-like 3
Curator
Summary (TAIR10)
encodes a protein similar to IAA amino acid conjugate hydrolase
Computational
Description (TAIR10)
IAA-leucine-resistant (ILR1)-like 3 (ILL3); FUNCTIONS IN: metallopeptidase activity, IAA-amino acid conjugate hydrolase activity; INVOLVED IN: proteolysis, auxin metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M20 (InterPro:IPR002933), Peptidase M20, dimerisation (InterPro:IPR011650), Peptidase M20D, amidohydrolase (InterPro:IPR010168), Peptidase M20D, mername-AA028/carboxypeptidase Ss1 (InterPro:IPR017439); BEST Arabidopsis thaliana protein match is: peptidase M20/M25/M40 family protein (TAIR:AT1G51760.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G54140-MONOMERBioGrid:20745EC:3.5.1.-eggNOG:COG1473
eggNOG:ENOG410IIRPEMBL:AB013387EMBL:AB018115EMBL:AF081066
EMBL:CP002688EnsemblPlants:AT5G54140EnsemblPlants:AT5G54140.1entrez:835501
Gene3D:3.30.70.360GeneID:835501Genevisible:O81641GO:GO:0009850
GO:GO:0010178Gramene:AT5G54140.1gramene_pathway:3.5.1.-gramene_pathway:PWY-1822
gramene_plant_reactome:1119580gramene_plant_reactome:6873774gramene_plant_reactome:6874739hmmpanther:PTHR11014
hmmpanther:PTHR11014:SF103HOGENOM:HOG000241403InParanoid:O81641InterPro:IPR002933
InterPro:IPR011650InterPro:IPR017439iPTMnet:O81641KEGG:ath:AT5G54140
KO:K14664MEROPS:M20.A06OMA:MQKIAESPaxDb:O81641
Pfam:O81641Pfam:PF01546PhylomeDB:O81641PIRSF:PIRSF005962
PRIDE:O81641PRO:PR:O81641ProteinModelPortal:O81641Proteomes:UP000006548
RefSeq:NP_200225.1SMR:O81641STRING:3702.AT5G54140.1SUPFAM:SSF53187
SUPFAM:SSF55031TAIR:AT5G54140tair10-symbols:ILL3TIGRfam:TIGR01891
TIGRFAMs:TIGR01891UniGene:At.29510UniProt:O81641
Coordinates (TAIR10) chr5:+:21965833..21967834
Molecular Weight (calculated) 46793.30 Da
IEP (calculated) 5.83
GRAVY (calculated) -0.07
Length 428 amino acids
Sequence (TAIR10)
(BLAST)
001: MANSSIVALL LLFVIASSVN GGDQEYPNQY LTEALGDKEW LVSVRRQIHE NPELLFELHK TSALIRRELD ELGVSYSYPV AKTGIVAQIG SGYPPVVALR
101: ADMDALPLQE LVEWDHKSKI DGKMHACGHD SHTTMLLGAA KLLSKRKRML NGTVRLLFQP AEEGGAGAFH MIKEGALGDS EAIFGMHVHT GLPTGELATI
201: SGPALASTSI FSVRMSGKSP ASSETYSCVD PVLAASSTIL ALQLIISREV DPLLSHVLSV TFMKSGGSEF DVIPAYVEFG GTLRSLTTNG INWLIKRLKE
301: VVEGQAEVQR CKADIDMHED DHPMYPATVN DHKLHEFTEK VLKLLLGPEK VKPANKVMAG EDFAFYQQKI PGYYIGIGIR NEEIGSVRSV HSPYFFLDEN
401: VLPIGSATFA ALAEMYLQEH QNQTKSGD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)