AT5G51290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.692 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Diacylglycerol kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: long-chain base (LCB) kinase 1 (TAIR:AT5G23450.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:20844252..20848157 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68466.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.59 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 608 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEGRDDEYC SFSNSGDRDG GLSGCFFLDH VGQVLLSRNH DGLSWKCLDS SDCEGTTCLG IIICENSETE IKFSDIYAVE FVSYGLVHSP KLGLRHAKEC 101: FRERLLNTQE MYRFTVHGFQ SSPKEPCLWN LAAFTFGHMD LQTCQSWMDQ LNYSLIKEVE RPRNLLVFVH PKSGKGNGSK VWETVSKIFI RAKVNTKVIV 201: TERAGHAFDV MASIQNKELH TYDGIIAVGG DGFFNEILNG YLLSRLKVPL PPSPSDSFNS VQSRGSSSVP EPGDEVHETD QKEHYPLLPD SVQEVMNFRT 301: VNGSCEGIED PDHPFSSERP RFGLIPAGST DAIVMCTTGA RDPVTSALHI ILGRKLFLDA MQVVRWKTAS TSTIEPYIRY AASFAGYGFY GDVISESEKY 401: RWMGPKRYDY VGTKIFLKHR SYEAEVMFEE AESENSKASL HTRSKTWPFR NTTRSEKILC RANCKICNSK VGWNSASTTL NPCPEKTRWC RTKGRFLSIG 501: AAVMSNRNER APDGLVVDAH LSDGFLHLIL IKDCSRPKYL WHLTELAKRG GEPLNFEFVE YHKTRAFTFT SFGEESVWNL DGEIFEAHQL SAQVLRGLIP 601: LFASGPEI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)