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AT5G50430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.628
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ubiquitin-conjugating enzyme 33
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ubiquitin-conjugating enzyme 33 (UBC33); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: regulation of protein metabolic process, post-translational protein modification; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 34 (TAIR:AT1G17280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G50430-MONOMERBioCyc:ARA:GQT-1704-MONOMERBioCyc:ARA:GQT-1705-MONOMEREC:2.3.2.23
eggNOG:ENOG410Z0ANeggNOG:KOG0894EMBL:AB012248EMBL:AF380654
EMBL:AY142040EMBL:CP002688EMBL:DQ027046EnsemblPlants:AT5G50430
EnsemblPlants:AT5G50430.1EnsemblPlants:AT5G50430.2entrez:835111Gene3D:3.10.110.10
GeneID:835111Genevisible:Q9FK29GO:GO:0000209GO:GO:0005524
GO:GO:0005783GO:GO:0016021GO:GO:0030433GO:GO:0031625
GO:GO:0061630hmmpanther:PTHR24067hmmpanther:PTHR24067:SF42HOGENOM:HOG000170329
InParanoid:Q9FK29InterPro:IPR000608InterPro:IPR016135KEGG:ath:AT5G50430
KO:K04554OMA:CESIEVIPaxDb:Q9FK29Pfam:PF00179
Pfam:Q9FK29Pfscan:PS50127PhylomeDB:Q9FK29PRIDE:Q9FK29
PRO:PR:Q9FK29PROSITE:PS50127ProteinModelPortal:Q9FK29Proteomes:UP000006548
RefSeq:NP_001032048.2RefSeq:NP_001032049.1RefSeq:NP_199854.1SMR:Q9FK29
STRING:3702.AT5G50430.1SUPFAM:SSF54495TAIR:AT5G50430tair10-symbols:UBC33
TMHMM:TMhelixUniGene:At.6859UniPathway:UPA00143UniProt:Q9FK29
Coordinates (TAIR10) chr5:-:20534366..20536307
Molecular Weight (calculated) 27358.00 Da
IEP (calculated) 9.07
GRAVY (calculated) -0.40
Length 243 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKACIKRL QKEYRALCKE PVSHVVARPS PNDILEWHYV LEGSEGTPFA GGFYYGKIKF PPEYPYKPPG ITMTTPNGRF VTQKKICLSM SDFHPESWNP
101: MWSVSSILTG LLSFMMDNSP TTGSVNTSVA EKQRLAKSSL AFNCKSVTFR KLFPEYVEKY SQQQVAEEEA ATQQTTTSEN QDFPQKDNAK VESEKSVGLK
201: KESIQEVGLK ERRRNKKEAL PGWIVLLLVS IVGVVMALPL LQL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)