suba logo
AT5G49740.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ferric reduction oxidase 7
Curator
Summary (TAIR10)
Encodes a chloroplast ferric chelate reductase. Shows differential splicing and has three different mRNA products. Expressed in the shoot, flower and cotyledon.
Computational
Description (TAIR10)
ferric reduction oxidase 7 (FRO7); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 6 (TAIR:AT5G49730.1); Has 2776 Blast hits to 2646 proteins in 341 species: Archae - 2; Bacteria - 242; Metazoa - 695; Fungi - 1174; Plants - 485; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G49740-MONOMERBioCyc:MetaCyc:AT5G49740-MONOMERBRENDA:1.16.1.7EC:1.16.1.7
eggNOG:ENOG410XNZYeggNOG:KOG0039EMBL:AB025613EMBL:AK227087
EMBL:AY912280EMBL:CP002688EnsemblPlants:AT5G49740EnsemblPlants:AT5G49740.1
entrez:835037GeneID:835037Genevisible:Q3KTM0GO:GO:0000293
GO:GO:0006811GO:GO:0009507GO:GO:0009767GO:GO:0016021
GO:GO:0031969GO:GO:0046872Gramene:AT5G49740.1gramene_pathway:1.16.1.7
gramene_pathway:PWY-5934hmmpanther:PTHR11972HOGENOM:HOG000006154InParanoid:Q3KTM0
InterPro:IPR000778InterPro:IPR013112InterPro:IPR013121InterPro:IPR013130
InterPro:IPR017927InterPro:IPR017938KEGG:ath:AT5G49740OMA:TNWRAIS
PaxDb:Q3KTM0Pfam:PF01794Pfam:PF08022Pfam:PF08030
Pfam:Q3KTM0Pfscan:PS51384PhylomeDB:Q3KTM0PRIDE:Q3KTM0
PRINTS:PR00466PRO:PR:Q3KTM0PROSITE:PS51384ProteinModelPortal:Q3KTM0
Proteomes:UP000006548RefSeq:NP_199785.2STRING:3702.AT5G49740.1SUPFAM:SSF52343
SUPFAM:SSF63380TAIR:AT5G49740tair10-symbols:ATFRO7tair10-symbols:FRO7
TMHMM:TMhelixUniGene:At.29770UniGene:At.7122UniProt:Q3KTM0
Coordinates (TAIR10) chr5:-:20205549..20208628
Molecular Weight (calculated) 84131.00 Da
IEP (calculated) 7.29
GRAVY (calculated) 0.43
Length 747 amino acids
Sequence (TAIR10)
(BLAST)
001: MDDHETPLLS KDLSSSSSSS SSSSSVVVSS LKWILKVVMS VIFVTWVVFL MMYPGSLGDQ ILTNWRAISS NTLFGLTGSM FLIFSGPILV IAILASLYLI
101: ISGEETVFTK KKITKFPRFR LWTFPVLVDG PFGVVSAAEF LGIMVFSVFF LWAIYAYTLR NLNVLDYFHV LPNNRSIFLL ELTGLRFGMI GLLCMVFLFL
201: PISRGSILLR LIDIPFEHAT RYHVWLGHIT MTFFSLHGLC YVVGWTIQGQ LLELLFEWKA TGIAVLPGVI SLVAGLLMWV TSLHTVRKNY FELFFYTHQL
301: YIVFVVFLAL HVGDYLFSIV AGGIFLFILD RFLRFYQSRR TVDVISAKSL PCGTLELVLS KPPNMRYNAL SFIFLQVKEL SWLQWHPFSV SSSPLDGNHH
401: VAVLIKVLGG WTAKLRDQLS TLYEAENQDQ LISPESYPKI TTCVEGPYGH ESPYHLAYEN LVLVAGGIGI TPFFAILSDI LHRKRDGKDC LPGKVLVVWA
501: IKNSDELSLL SAIDIPSICH FFSKKLNLEI HIYVTRQSEP CLEDGMVHKV VHPSVKTPWT NGCSMSVLVG TGDNIWSGLY LIISTIGFIA MITLVDIFYI
601: NKYNITTWWY KGLLFVVCMV ASVLIFGGLV VVFWHRWEHK TGEVEANGND KVDLNGEETH NPSAAELKGL AIEEDVQNYT TIRYGTRPAF REIFESLNGK
701: WGSVDVGVIV CGPATLQTTV AKEIRSHSIW RSANHPLFHF NSHSFDL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)