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AT4G09350.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Chaperone DnaJ-domain superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 22215 Blast hits to 22211 proteins in 3226 species: Archae - 172; Bacteria - 9488; Metazoa - 3742; Fungi - 1942; Plants - 2004; Viruses - 8; Other Eukaryotes - 4859 (source: NCBI BLink).
Protein Annotations
DNASU:826517EC:1.6.5.-eggNOG:COG0484eggNOG:KOG0715
EMBL:AK175888EMBL:AL117386EMBL:AL161514EMBL:BX829231
EMBL:CP002687EnsemblPlants:AT4G09350EnsemblPlants:AT4G09350.1entrez:826517
Gene3D:1.10.287.110GeneID:826517Genevisible:Q9SMS0GO:GO:0006810
GO:GO:0009507GO:GO:0009535GO:GO:0010598GO:GO:0016021
GO:GO:0016491GO:GO:0048038Gramene:AT4G09350.1hmmpanther:PTHR24078
HOGENOM:HOG000243718InterPro:IPR001623InterPro:IPR018253KEGG:ath:AT4G09350
OMA:VFFKEQYPaxDb:Q9SMS0Pfam:PF00226Pfam:Q9SMS0
Pfscan:PS50076PhylomeDB:Q9SMS0PIR:T17134PRIDE:Q9SMS0
PRINTS:PR00625PRO:PR:Q9SMS0PROSITE:PS00636PROSITE:PS50076
ProteinModelPortal:Q9SMS0Proteomes:UP000006548RefSeq:NP_192673.1scanprosite:PS00636
SMART:SM00271SMR:Q9SMS0STRING:3702.AT4G09350.1SUPFAM:SSF46565
TAIR:AT4G09350TMHMM:TMhelixUniGene:At.33701UniProt:Q9SMS0
Coordinates (TAIR10) chr4:-:5931317..5932152
Molecular Weight (calculated) 28497.70 Da
IEP (calculated) 5.46
GRAVY (calculated) -0.55
Length 249 amino acids
Sequence (TAIR10)
(BLAST)
001: MAYATSTYAR TSCIILPKIQ NGAHFTDDTK AFRRITARRV TRIYASQGPT KPSKPSPGVD TRIHWESPDE GWIGGRSDPA KSVDEDKTNL LSDEKFAELI
101: KDSFDSHYQF LGVSTDADLE EIKSAYRRLS KEYHPDTTSL PLKTASEKFM KLREVYNVLS DEETRRFYDW TLAQEVASRQ AEKMRMKLED PKEQDFRGYE
201: SIPDMVDRLG GRNMELSDQA MTALTFDILI VLFAVCCIAF VIVFKDPSY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)