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AT5G49730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ferric reduction oxidase 6
Curator
Summary (TAIR10)
Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.
Computational
Description (TAIR10)
ferric reduction oxidase 6 (FRO6); CONTAINS InterPro DOMAIN/s: Ferredoxin reductase-type FAD-binding domain (InterPro:IPR017927), Ferric reductase, NAD binding (InterPro:IPR013121), Cytochrome b245, heavy chain (InterPro:IPR000778), FAD-binding 8 (InterPro:IPR013112), Riboflavin synthase-like beta-barrel (InterPro:IPR017938), Ferric reductase-like transmembrane component, N-terminal (InterPro:IPR013130); BEST Arabidopsis thaliana protein match is: ferric reduction oxidase 7 (TAIR:AT5G49740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1293-MONOMEREC:1.16.1.7eggNOG:ENOG410XNZYeggNOG:KOG0039
EMBL:AB025613EMBL:AK230058EMBL:AY091140EMBL:AY114002
EMBL:CP002688EnsemblPlants:AT5G49730EnsemblPlants:AT5G49730.1entrez:835036
GeneID:835036Genevisible:Q8RWS6GO:GO:0000293GO:GO:0005886
GO:GO:0006811GO:GO:0009416GO:GO:0016021GO:GO:0046872
Gramene:AT5G49730.1hmmpanther:PTHR11972HOGENOM:HOG000006154InParanoid:Q8RWS6
InterPro:IPR000778InterPro:IPR013112InterPro:IPR013121InterPro:IPR013130
InterPro:IPR017927InterPro:IPR017938KEGG:ath:AT5G49730OMA:WHLSERR
PaxDb:Q8RWS6Pfam:PF01794Pfam:PF08022Pfam:PF08030
Pfam:Q8RWS6Pfscan:PS51384PhylomeDB:Q8RWS6PRIDE:Q8RWS6
PRINTS:PR00466PRO:PR:Q8RWS6PROSITE:PS51384ProteinModelPortal:Q8RWS6
Proteomes:UP000006548RefSeq:NP_199784.2STRING:3702.AT5G49730.1SUPFAM:SSF52343
SUPFAM:SSF63380TAIR:AT5G49730tair10-symbols:ATFRO6tair10-symbols:FRO6
TMHMM:TMhelixUniGene:At.29770UniProt:Q8RWS6
Coordinates (TAIR10) chr5:-:20201355..20204455
Molecular Weight (calculated) 83462.70 Da
IEP (calculated) 7.95
GRAVY (calculated) 0.43
Length 738 amino acids
Sequence (TAIR10)
(BLAST)
001: MDDYETPLLS KDSSSSSSVI TSSLKWILKV VMSMIFVTWV VFLMMMYPEQ LGDDFLTFVS SKTFLGTTGT MFLIFSCPIL VISVLASLYL IISGEDKVFT
101: KKKISKFPRF RLWTFPVLVD GPFGVVSAAE FLGIMVFSVF FLWSIYAYTL RNLDLLERFH VLPKNRSILL LEVTGLRLGM IGLLCMVFLF LPISRGSILL
201: RLIDIPFEHA TRYHVWLGHI TMAFFSLHGL CYVVGWIIQG QLLELIFSWN AIGIAILPGV ISLVAGLLMW VTSLHTVRKN YFELFFYTHQ LYIVFIVFLA
301: LHVGDYMFSI VAGGIFLFIL DRFLRFCQSR RTVDVISAKS LPCGTLELVL SKPPNMRYNA LSFIFLQVRE LSWLQWHPFS VSSSPLDGNH HVAVLIKVLG
401: GWTAKLRDQL SNLYEAENQD QLISPQSYPK ITTCVEGPYG HESPYHLAYE NLVLVAGGIG ITPFFAILSD ILHRKRDGKA CLPSKVLVVW AIKNSDELSL
501: LSAIDIPSIC PFFSKKLNLE IHIYITRQSE PRLEDGMVHK VVHPSVKLPR TNGCSMSVLV GTGDNIWSGL YLIISTIGFI SMITLLDIFY IKRYNITTWW
601: YKGLLFVGCM VASVLIFGGL VVVFWHRWEH KTGEVEANGN DKVDLNGEET HNPSAAELKG LAIEEDVQNY TTIRYGTRPA FREIFESLNG KWGSVDVGVI
701: VCGPATLQTT VAKEIRSHSI WRSANHPLFH FNSHSFDL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)