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AT5G48570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : FKBP-type peptidyl-prolyl cis-trans isomerase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FKBP-type peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding; INVOLVED IN: protein folding; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: rotamase FKBP 1 (TAIR:AT3G25230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G48570-MONOMERBioGrid:20159BRENDA:5.2.1.8EC:5.2.1.8
eggNOG:COG0545eggNOG:KOG0543EMBL:AB015468EMBL:AK228029
EMBL:AK317098EMBL:CP002688EnsemblPlants:AT5G48570EnsemblPlants:AT5G48570.1
entrez:834913Gene3D:1.25.40.10GeneID:834913Genevisible:Q9FJL3
GO:GO:0000413GO:GO:0003755GO:GO:0005528GO:GO:0005634
GO:GO:0005773GO:GO:0005789GO:GO:0061077GO:GO:0070370
Gramene:AT5G48570.1hmmpanther:PTHR10516hmmpanther:PTHR10516:SF279HOGENOM:HOG000237912
InParanoid:Q9FJL3IntAct:Q9FJL3InterPro:IPR001179InterPro:IPR011990
InterPro:IPR013026InterPro:IPR019734InterPro:IPR023566iPTMnet:Q9FJL3
KEGG:ath:AT5G48570KO:K01802MINT:MINT-8375584ncoils:Coil
OMA:EGEKWEKPANTHER:PTHR10516PaxDb:Q9FJL3Pfam:PF00254
Pfam:PF13181Pfam:PF13414Pfam:Q9FJL3Pfscan:PS50005
Pfscan:PS50059Pfscan:PS50293PhylomeDB:Q9FJL3PRIDE:Q9FJL3
PRO:PR:Q9FJL3PROSITE:PS50005PROSITE:PS50059PROSITE:PS50293
ProteinModelPortal:Q9FJL3Proteomes:UP000006548Reactome:R-ATH-3371568RefSeq:NP_199668.1
SMART:SM00028SMR:Q9FJL3STRING:3702.AT5G48570.1SUPFAM:SSF48452
SUPFAM:SSF54534TAIR:AT5G48570tair10-symbols:ATFKBP65tair10-symbols:FKBP65
tair10-symbols:ROF2UniGene:At.29841UniProt:Q9FJL3
Coordinates (TAIR10) chr5:-:19690746..19693656
Molecular Weight (calculated) 65226.60 Da
IEP (calculated) 4.88
GRAVY (calculated) -0.70
Length 578 amino acids
Sequence (TAIR10)
(BLAST)
001: MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH
101: VIKGWDLGIK TMKKGENAIF TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK
201: SDGVEFTVKE GHFCPALSKA VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR KVIKKILKEG EGYERPNEGA
301: IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD
401: MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA
501: HAYLETADLD LAELDIKKAL EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)